Effector profile
| PlantPEAD ID: PlantPEAD00517 | Uniprot ID: D0NIW0 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: Avr10 | NCBI Gene ID: XM_002901008 | |
| Entry name: AVR10_PHYIT | Protein name: RxLR effector protein Avr10 | |
| DOI: 10.1094/MPMI.2001.14.12.1444 | ||
Gene/Protein information
Gene sequence:
ATGCGTCTGTCCTTCATCATCTTTGCCATCTCCCTTCTCGCAGGCGGTAGCGGAGCAGCTGAGGCCCTCCACCCTGCGTCGGATGTCTTGACATTGCGAGGTACAAACCAAGGCGCAAGCACCGGCAAGAGATCGTTGCGCTACGACAATAACGCGGAGCGCGCTGGCGAGGAGGACGATGAAGAAAGGGCTTTCCCAGGTGCAGAGGAGCTTTCTAGGCTCGCGAACCTAGCCCATACGAGCAAGGCTGATTCTCTTGGGACATCGCTGAAGAATTTTTTTAAGCAACTAGATAAAGCTAACGTCAACCCGTCCAACATTCATAAGTACGGCTTCTCAGGCGAAGAATTCGATCAACTCCGTAAACGGTTCGGAACGTGGTACAGACACTACAAGGACATTGAGTAG
Protein sequence:
MRLSFIIFAISLLAGGSGAAEALHPASDVLTLRGTNQGASTGKRSLRYDNNAERAGEEDDEERAFPGAEELSRLANLAHTSKADSLGTSLKNFFKQLDKANVNPSNIHKYGFSGEEFDQLRKRFGTWYRHYKDIE
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14981.6 | 135 | 6.42 | -0.653 | 41.42 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: pif:PITG_11484
PRINTS: