Effector profile
| PlantPEAD ID: PlantPEAD00537 | Uniprot ID: A0A0P1ATM7 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4781 | Pathogen type: Oomycota |
| Species: Plasmopara halstedii | Strain: | Other name: |
| Gene name: PhRXLR-C11 | NCBI Gene ID: CCYD01001204 | |
| Entry name: RLR11_PLAHL | Protein name: Secreted RxLR effector protein RXLR-C11 | |
| DOI: 10.1111/tpj.14157 | ||
Gene/Protein information
Gene sequence:
ATGCATTTCTCCCTAGTCTTGCTCGTGTTTGCTGCCATCGTGATCCCAATTTGTGCAGACACATCGACGACCAAGGATTACGATGACAAAAAATCGCTGCAGACAAGTAACTTTGGGACAGCTGCTGTGGCAAATATGCTACACGTATTGCAAAGCTCAGACAATAGTAAGAGGCTTCTCAGGATGAACGACAAAGCGGTCATCAGTGATCATGAGGAAGAAAGAAGCTCTCTGGTCAAGAATAAGCAAAAGAAGCTTAGTTATCGCATCAAAAAGGGGTGGGAAAACGTGAAGAAACCTTTTAAGAAAAGCGCGAAGATTATCGAAAAGCCTTTAAAGAAGGGCTCGAAGATTATCATCGAACCTTTTAAAAAGGTCTCGAAGATTATCAAGAAGTTTGCTATAAAGGGCGCGAAGATTGTCAAGAAGCCTTTTAAGAAAAGCGCAAGGATCATCAAGAAGTCTTTTAAGAACCTAAATTGA
Protein sequence:
MHFSLVLLVFAAIVIPICADTSTTKDYDDKKSLQTSNFGTAAVANMLHVLQSSDNSKRLLRMNDKAVISDHEEERSSLVKNKQKKLSYRIKKGWENVKKPFKKSAKIIEKPLKKGSKIIIEPFKKVSKIIKKFAIKGAKIVKKPFKKSARIIKKSFKNLN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18186.8 | 160 | 10.3 | -0.426 | 27.71 |
Plant infestation information
| Experimental plant: Helianthus annuus (related: common sunflower) | |
| Susceptible plant: Helianthus annuus | Disease name: Downy mildew of sunflower |
| Host classification: Eudicots | NCBI Species: 4232 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: