Effector profile
| PlantPEAD ID: PlantPEAD00539 | Uniprot ID: A0A0P1AXF0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4781 | Pathogen type: Oomycota |
| Species: Plasmopara halstedii | Strain: | Other name: |
| Gene name: PhRXLR-C06 | NCBI Gene ID: CCYD01001640 | |
| Entry name: RLR06_PLAHL | Protein name: Secreted RxLR effector protein RXLR-C06 | |
| DOI: 10.1111/tpj.14157 | ||
Gene/Protein information
Gene sequence:
ATGCGTATTCAGCTTCTGTGGCTTTCCTTTGCTGTGTTGAGCACCATTCTATCGACTTGTGATGCTACTTCTGACAAATTGGATCCGCAGAGAGTGCAACCGAATCAAAATGGATCAGGACACAATCAATCCATTCGATCCGCTTTAAAGACCAGTCATGGCAAGACAATAGCAGATGATGAAGAGCGATTTATTTCGCTGTCAGGCATGTCGGAGAAGATTGCCAAGTATTACAAAGCTATTGTTGCCAAACTCTCTAAGTATTTCAGAGACTATCACGAGAGGCGCGAAATAAGGAAGCAGCGAATTTTAAATAAAAGTTTCGCCGAGATGATGGCGGGACAAAAGTCAGTGGAAGACATTGGAAGAAATCAAGACGCAAGTTTTATGTCAAGTTCATTCTTGTGGACACCTGAAGCATTCAAGAGCATACTGCATAAGTACGCACTCTTTCTCTACAAGTATGGAAATGGACATCTTGCGACTGTACCAGTAAAAACTGGTTAA
Protein sequence:
MRIQLLWLSFAVLSTILSTCDATSDKLDPQRVQPNQNGSGHNQSIRSALKTSHGKTIADDEERFISLSGMSEKIAKYYKAIVAKLSKYFRDYHERREIRKQRILNKSFAEMMAGQKSVEDIGRNQDASFMSSSFLWTPEAFKSILHKYALFLYKYGNGHLATVPVKTG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19128.9 | 168 | 9.68 | -0.457 | 44.48 |
Plant infestation information
| Experimental plant: Helianthus annuus (related: common sunflower) | |
| Susceptible plant: Helianthus annuus | Disease name: Downy mildew of sunflower |
| Host classification: Eudicots | NCBI Species: 4232 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000048
Pfam:
SMART:
KEGG:
PRINTS: