Effector profile
PlantPEAD ID: PlantPEAD00566 | Uniprot ID: A1L017 | Source: Article |
Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
Species: Phytophthora infestans | Strain: 90128 | Other name: Potato late blight agent, Botrytis infestan |
Gene name: EPIC2B | NCBI Gene ID: AY935252 | |
Entry name: EPI2B_PHYIN | Protein name: Cystatin-like cysteine protease inhibitor EPIC2B | |
DOI: 10.1073/pnas. 0809201106 |
Gene/Protein information
Gene sequence:
ATGTCATTCCTTCGTCCCACCCTCGCTCTCCTGGCCGTCACGGCCCTGGTGACCACGTCCGGCCAACTGAACGGATACTCAAAGAAGGAAGTCACGCCAGAGGACACGGAGCTGCTCCAGAAGGCGCAGAGCAATGTGAGCGCATACAACAGCGACGTCACCTCGCGCATCTGCTACCTGAAGGTCGACAGTCTCGAGACTCAAGTCGTCTCGGGCGAGAACTACAAGTTCCACGTTTCCGGTTGCAGCGTCAACTCGGACAAGGAGCTGGGCGGCTGTGCCAATCAGAATTGCGAGTCATCCAAGTACGACATCGTCATCTACTCGCAGTCGTGGACCAACACGCTGAAGGTGACGTCGATTACGCCCGCCAACTAA
Protein sequence:
MSFLRPTLALLAVTALVTTSGQLNGYSKKEVTPEDTELLQKAQSNVSAYNSDVTSRICYLKVDSLETQVVSGENYKFHVSGCSVNSDKELGGCANQNCESSKYDIVIYSQSWTNTLKVTSITPAN
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
13596.2 | 125 | 5.28 | -0.254 | 25.27 |
Plant infestation information
Experimental plant: Solanum lycopersicum (related: tomato) | |
Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|---|---|---|---|
Q8S335
|
Cysteine protease
|
Rcr3
|
Solanum lycopersicum (related: tomato)
|
MAMKVDLMNILITLFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESVNKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTEFKINDLSDDYMPSNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGCNGGLMTNAFDFIIENGGISRESDYEYLGEQYTCRSREKTAAVQISSYKVVPEGETSLLQAVTKQPVSIGIAASQDLQFYAGGTYDGNCADQINHAVTAIGYGTDEEGQKYWLLKNSWGTSWGENGFMKIIRDSGDPSGLCDIAKMSSYPNIA
|
External Links
Interpro: IPR000010,IPR046350
Pfam:
SMART:
KEGG:
PRINTS: