Effector profile
| PlantPEAD ID: PlantPEAD00569 | Uniprot ID: D0MXE4 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: PITG_02860 | NCBI Gene ID: XM_002907697 | |
| Entry name: RXLRC_PHYIT | Protein name: RxLR effector protein PITG_02860 | |
| DOI: 10.1104/pp.16.00178; 10.1073/pnas.1808585115 | ||
Gene/Protein information
Gene sequence:
ATGCGACTTGCTTTCCTCCTGCTTGCCGTTTCACACTTTATCTGCGGGAACGCACTACCAACAAACGTGAAGAGCTCGCCAGTGGTGTCGCCTGGTCTAATCCAGTCGTTTGACAATGCGCAGAAACCCGTCGTCATGAGCAGAAAACTTTTGCGCACTGATGAACGTTTGAGCGAAGCCAATGAAGAGAGAACCAAACTGAGTGAGCTGTTCCGTCTCGACGACGATGAAGTGGCGGCGATCAAGGAGCTATCTTCGATGTTCTCGGCATTCCTGCAGAAGAAGAGCCAGGCATTTGATGTATACGATGAAATATTTCGTTCGGGATATCCGATTGATACAGCCGCAAGAATCAGCAACCTATATACCAAGTATCTTAAAGACCCTCAAGCTTTTCGTGGCCCATAA
Protein sequence:
MRLAFLLLAVSHFICGNALPTNVKSSPVVSPGLIQSFDNAQKPVVMSRKLLRTDERLSEANEERTKLSELFRLDDDEVAAIKELSSMFSAFLQKKSQAFDVYDEIFRSGYPIDTAARISNLYTKYLKDPQAFRGP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15236.5 | 135 | 7.82 | -0.219 | 42.73 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
StNRL1
|
Solanum tuberosum (related: related: potato)
|
MSTKKEELLSSAMKRTSDWIFSQEIPSDVTVNAGGTSFALHKFPLVSKSGYIRKLVSESNDADVSTINIPDIPGGGEAFELAAKFCYGINFEISTENIALLRCAAEYLEMTEDYAVANLVERTEAYFNEVAIKSLAGAVTILRSSENLLPIAEKVKLVSRCIDTIAYTACKDNQFSTSGRAEAGINGSTFSNPKPIVDWWSEDITVLRIDFFQRVLIAMMARGFKRYALGPILMLYAQKSLRGLEIFGKGRKKIEPKQEHEKRVVLETIVSLLPMEKNGLSVSFLSMLLRAAIYLETTIACRLDLEKRMALQLGQAVLDDLLIPSCSFTGDTLYDVETVQRIMMNFLDSEEGNRLGDEEYHVSPSLSDMERVGKLMENYLAEIASDRNLSVTNFINLAEVIPEQARITEDGMYRAIDIYLKAHPVLSDIERKKVCGVMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQRLHDGSQLVATEPPALVPSKRDHQFSTNPVSDEVSSLKRENQELKFELLKMKTRLIDIEKPNLNTSATSSPLVITHPSAGKPPLPRKSNFMSSVSKKLGRFIRADGLMQGKARNKPSKDRRHSIS
|
External Links
Interpro:
Pfam:
SMART:
KEGG: pif:PITG_02860
PRINTS: