Effector profile
| PlantPEAD ID: PlantPEAD00571 | Uniprot ID: D0N0Z8 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: PexRD24(PITG_04314) | NCBI Gene ID: XM_002905913 | |
| Entry name: RD24_PHYIT | Protein name: RxLR effector protein PexRD24 | |
| DOI: 10.1038/ncomms10311 | ||
Gene/Protein information
Gene sequence:
ATGCATTCAAGTCTTCTTTGGTTAGGCGCAGTCGTCGCTCTCCTTGCGGTCAATAATGTCACGGCTGTATCGACCGAAGCTAATGGGCAGGTTGCCCTATCTACGAGCAAAGGCCAACTAGCTGGCGAGCGTGCTGAGGAGGAAAACAGCATCGTCAGGTCCCTCCGCGCAGTCGAGACAAGTGAAGACGAAGAAGAGAGGGATTTGCTTGGGCTTTTTGCCAAGAGCAAGCTGAAGAAGATGATGAAAAGCGAAAGCTTCAAGCTGAAGAGGTTTGGAGAATGGGACGATTTCACAGTGGGTTATATTCGTGAAAAGCTCAAAAACAAGTATCCGGACCTCCTTTTGAACTACCTAAATGTCTACAAGAAGGCAGGCAATGAGATCGTTAGACACGCTAACAATCCCAACAAGGTGACTTTCTCGAACAAAGTCCGAGCTCGTATCTACAAAACCAACTCGTAG
Protein sequence:
MHSSLLWLGAVVALLAVNNVTAVSTEANGQVALSTSKGQLAGERAEEENSIVRSLRAVETSEDEEERDLLGLFAKSKLKKMMKSESFKLKRFGEWDDFTVGYIREKLKNKYPDLLLNYLNVYKKAGNEIVRHANNPNKVTFSNKVRARIYKTNS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17381.9 | 154 | 9.49 | -0.482 | 32.43 |
Plant infestation information
| Experimental plant: Solanum tuberosum (related: potato) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG: pif:PITG_04314
PRINTS: