Effector profile
PlantPEAD ID: PlantPEAD00572 Uniprot ID: D0N118 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 4787 Pathogen type: Oomycota
Species: Phytophthora infestans Strain: strain T30-4 Other name: Potato late blight agent, Botrytis infestan
Gene name: PexRD20(PITG_04339) NCBI Gene ID: XM_002905933
Entry name: RD20_PHYIT Protein name: RxLR effector protein PexRD20
DOI: 10.1038/nature06203; 10.1371/journal.ppat.1004057; 10.1093/jxb/ery360
Gene/Protein information
Gene sequence:
ATGCGATGTCACTACTTTGTTTTGCTGGCTGTTGCCGCTTTCTTGGCAGGTGCAAATGTTGCTGTGGCGACGACGGACGCCCAGCTGAGTGACGCCCGAGCGGTCCGCGCCTCTTTTAATACCAAGCGCGCGCTGCGGTCCCATACTAAGGCGACTGACCATGGCGAGGAGAGAGCTTACAAGCCCAGTCTCAGTGTCGTCGAGAGCCTCAACAACTGGATGCAAAGAGCATCGAAGAATATCTTGCCTGACGACGTTATTTTGGTCATGGCCAGTAAGGCGATGACAAAGAAGACCTCATCTTCGGACGCTGTCTTCGCGATGCTCCAGCTTGACCAGGGACTAAAGGGAATCCTGAGCAATCCCAACTTGAAACAATTTGCCTACTATCTCGTATTGACGGAGAAAGCGCCAAGCCAGGCTCTGATCACCAAGTTGATCAGTCAATACGGAGACGACGTAGTGGCGAAATATCTCTTCGACATCAAGCACAAAGCGATCAACGTGAGCGAGAAACTCAAGGCCGAAGCGAGGTTTTGGCAAGGCGCGCAGTATGTCAAGTGGTTCGATGAAGGGGTAACGCCAGCTCTGGTCCGTCAAAAATACAACGTCCACCCCGAAACGTGGTACAAGAACCCGTACGAGGGCGTGTACTGGGAATACACTGGCGTGTACGCCAAATTGGCGAGCAAGTCAAATAAACCCCTGCCCGTGGAAGTATAG
Protein sequence:
MRCHYFVLLAVAAFLAGANVAVATTDAQLSDARAVRASFNTKRALRSHTKATDHGEERAYKPSLSVVESLNNWMQRASKNILPDDVILVMASKAMTKKTSSSDAVFAMLQLDQGLKGILSNPNLKQFAYYLVLTEKAPSQALITKLISQYGDDVVAKYLFDIKHKAINVSEKLKAEARFWQGAQYVKWFDEGVTPALVRQKYNVHPETWYKNPYEGVYWEYTGVYAKLASKSNKPLPVEV
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26930 240 9.42 -0.227 31.58
Plant infestation information
Experimental plant: Nicotiana benthamiana (no common name found)
Susceptible plant: Solanum lycopersicum, Solanum tuberosum Disease name: Late blight
Host classification: Eudicots NCBI Species: 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.