Effector profile
| PlantPEAD ID: PlantPEAD00574 | Uniprot ID: D0N4E0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: PITG_22798 | NCBI Gene ID: XM_002998349 | |
| Entry name: RXLRA_PHYIT | Protein name: RxLR effector protein PITG_22798 | |
| DOI: 10.3390/ijms18020409 | ||
Gene/Protein information
Gene sequence:
ATGAGATGCTACTACGTCCTTATAGCAATAGCTGCCGTCCTGAGTGGAATTGCAACGGCAGCTGCAGACTCAAGGCACAACAAGTTAGCTGCGGTCGATAGTGACAAGACTACCGATAGAGTGGAGCTATTTCTGCGTCGGAATGATGAATTGGACGCTGAGAACACTGATGAACGGATAGTAGCGGGCGCCATACCCCTCAACGCCAGAATAATTAAGAGGCTCGTCAAACTCGAAAAGAAAATGGTCGATCCAAAGTTGGCCGATGACTTGCTGGAAGGAACCACACTTAAAACGGAACTCGACGCTGCCCTCCCATATGCAGGGAGGACACAAGTATTCGAGCGCTGGCACGCACAAGGTCTGGATCCGAGCTCGATAACCAAAGCCGTCAACATACACCCCGCCATCGAAAAGAAGTACAGGATTGTCTACATGATGTACGAGCTCTTCGTAAAGTCTGCTGATAAGAAACGACTGGCAAAGCTAAAAAGGAAGAGGACCAACGATTAA
Protein sequence:
MRCYYVLIAIAAVLSGIATAAADSRHNKLAAVDSDKTTDRVELFLRRNDELDAENTDERIVAGAIPLNARIIKRLVKLEKKMVDPKLADDLLEGTTLKTELDAALPYAGRTQVFERWHAQGLDPSSITKAVNIHPAIEKKYRIVYMMYELFVKSADKKRLAKLKRKRTND
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19226.3 | 170 | 9.47 | -0.326 | 38.35 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG: pif:PITG_22798
PRINTS: