Effector profile
| PlantPEAD ID: PlantPEAD00583 | Uniprot ID: D0NEV2 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: PITG_10232 | NCBI Gene ID: XM_002902023 | |
| Entry name: RXLRI_PHYIT | Protein name: RxLR effector protein PITG_10232 | |
| DOI: 10.3389/fpls.2017.02155 | ||
Gene/Protein information
Gene sequence:
ATGCGCCTTGGCTATTTGATTGTGGGTTGCGCGGTAGCCCTCCTCGCTACAACCGATGGAGTGGTGGACGCCTCAAGTAAACATAAGCAGCTGTCCACTGATGTCCCTCGTCCAGCTGATGACATTTCATCAGAACGGTTCCTAAGAAGTCAAGATACTCCTGAAGATGATGGAAACCCCGCGCACGAAGACCGAGGATACTTAACAGTGCTTACCAACGCAGCCATGCATCCCTTGAGGGAGCGGAAAATGAAGAATCAAATTGCAAACTTGATCAAGATGGACGCAACTGACGCAGAGTTATATGCGGCAGGAGTGCAACCCCACCGTCTCTTCGACGTCATAAGGCACAAAGACGAATCTGTTGAAATGTCCCTTTCCCAGTGGGTGACCATGGTGCACCAGCATCAGTTTCCGTCGGACTATATCTGGAAAAGTCAAGCGTACCGCAGATTTAAGCAATACGCTGGATTTTACGATGGCATGCAGAGAAATGGCCAACGAGTGGCATCGACAACATGA
Protein sequence:
MRLGYLIVGCAVALLATTDGVVDASSKHKQLSTDVPRPADDISSERFLRSQDTPEDDGNPAHEDRGYLTVLTNAAMHPLRERKMKNQIANLIKMDATDAELYAAGVQPHRLFDVIRHKDESVEMSLSQWVTMVHQHQFPSDYIWKSQAYRRFKQYAGFYDGMQRNGQRVASTT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19642.1 | 173 | 6.65 | -0.59 | 47.47 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: pif:PITG_10232
PRINTS: