Effector profile
| PlantPEAD ID: PlantPEAD00609 | Uniprot ID: G1FQR7 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 67593 | Pathogen type: Oomycota |
| Species: Phytophthora sojae | Strain: strain P7076 | Other name: Phytophthora megasperma f. sp. glycines |
| Gene name: Avh6(Avr1d) | NCBI Gene ID: JN253642 | |
| Entry name: AVH6_PHYSO | Protein name: RxLR effector protein Avh6 | |
| DOI: 10.1094/MPMI-02-13-0035-R | ||
Gene/Protein information
Gene sequence:
ATGCGTCTCTCCAGCACCACCTTTGTTGTTCTTGCGGCCGTCCTCCTCGCAAGCGGCACTGCAGTATCGAAGGCCGACGAGACTGGCGTGACGAACGTAAACGCCGTTCACTCGCCGAATGTTCTCGCTGGCGTGGACAAGCGATTTCTCCGAAGCCACCACACGGAGGATGGCAAAGCCAAACTCTCCAACTACGACAATGAAGAGCGGAACGGCTTGTTCGCCGCGGGCACTCTGTCAGATATGGCCAACGATATGATTTTCCGCTTCAAGATGTTCACGAAATGGAAGGCCAATGGACACCTCCCGAAAGCAATCAAAAAGGACATCCCCAGGAGTCTCTACAAGGCGTACAAAATCCACCATCGCATGAATTAG
Protein sequence:
MRLSSTTFVVLAAVLLASGTAVSKADETGVTNVNAVHSPNVLAGVDKRFLRSHHTEDGKAKLSNYDNEERNGLFAAGTLSDMANDMIFRFKMFTKWKANGHLPKAIKKDIPRSLYKAYKIHHRMN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13904 | 125 | 9.94 | -0.349 | 26.99 |
Plant infestation information
| Experimental plant: Glycine max (related: soybean) | |
| Susceptible plant: Glycine max | Disease name: Root and stem rot of soybean |
| Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: