Effector profile
| PlantPEAD ID: PlantPEAD00667 | Uniprot ID: Q8RP04 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. maculicola strain ES4326 | Other name: |
| Gene name: HopPmaL | NCBI Gene ID: AF458050 | |
| Entry name: HPAB3_PSEYM | Protein name: Effector protein hopAB3 | |
| DOI: 10.1126/science.295.5560.1722 | ||
Gene/Protein information
Gene sequence:
TCCTATGCATCGCTATGAAGGCATGACGCCTCCTTCCATAGCGTCAGCTTGATGCATAGGCATTTTGAAATTCCTATGCATCGAGACATGGATGTGAGGGTGCATGGTAGATCGAGCGCGGTACGCCGAGATTTGCCGGGAGAAGTAAGGCGGAACTTTTTCTTCCCCATTGCCACTCATCGTTGATTTTTACGGATGAGTTTACCAGCATCCAGCATCCAGAAAACCGCAGAGGATAAGCATATGGTAGGGATCAGTGGTAGAGCAGGTCCATCGGGTTCTTACAATTATAGTGGGCACACAGACAACCCTGAACCAGTATCCGGGCGCGCACGCGATTCCAACAGCGAAGCCAACTCCTCGAACAGCCCGCAGGTGCCGCCCCCCTTGAACGCGCCCGCATCTCCGATGCCAGCCGGACGTCCGAGGTTTTTGCGATCCATGGCGTTGTCGAGCCAAACCAGAGAGTGGCTGGAGAAGGGCATGCCGACAGAGGCGGAGGCTGGAGTGCCCATCAGGTTGCAGGAGCGTGCCGCTAACACCGCGCCGCAGGCACGTGCAGAGGAAAGACATACGCAACCTGCCGATGCTGCGGCGCCACATGCACGTGCAGAGAGAGGACGCACGCTGCAGGCGCCTGCCAGTACCTCTCCACTTTACACAGGTGCGGTGCCACGCGCCAATAGAATTGTTCAACAATTGGTCGAAGCGGGCGCTGATCTTGCCAATATTCGCACCATGTTCCGCAATATGTTGAGGGGCGAAGAGATGATTCTTTCTCGAGCCGAACAGAATGTTTTTCTCCAGCATTTTCCTGACATGCTACCTTGTGGAATTGATCGCAACTCAGAGCTTGCTATCGCGCTCCGTGAGGCGCTCCGTAGAGCGGATAGCCAACAGGCGGCGCGAGCGCCAGCAAGGACACCACCACGGTCCTCTGTCAGGACGCCGGAGCGGTCGCCAGCGCCGCGCACCGCTACGGAATCATCATCGGGTAGCAACCAGCGTTCATTATTAGGCCGGTTCGCCGGGTTGATGACGTCTAATCAGAGACGTCCGTCGAGCGCTTCGAACGCGTCTACCTCTCAAAGGCCAGTAGACAGAAACCCGCCACGCATCAACTTGATGCCCACAGGCGCTAACCGGGTTGCGATGCGTAATCGTGGTAATAACGAGGCCGACGCCGCGCTGCAGGCATTGGCTCAAAATGGGATCAACATGGAGGACCTGCGCGCTGCGCTTGAAGCATATATAGTGTGGTTACGCCCGATCCCTCTGGACATAGCGAACGCGTTGGAGGGTGTGGGCATTACCCCAAGATTTGACAACCCAGAGGAGGCGAAAGTCGACAACCCGCTGATGAATTTGAGTTCTGCGCTCAAGCGTCGGCTTGATGCATAGGCATTTTGA
Protein sequence:
MVGISGRAGPSGSYNYSGHTDNPEPVSGRARDSNSEANSSNSPQVPPPLNAPASPMPAGRPRFLRSMALSSQTREWLEKGMPTEAEAGVPIRLQERAANTAPQARAEERHTQPADAAAPHARAERGRTLQAPASTSPLYTGAVPRANRIVQQLVEAGADLANIRTMFRNMLRGEEMILSRAEQNVFLQHFPDMLPCGIDRNSELAIALREALRRADSQQAARAPARTPPRSSVRTPERSPAPRTATESSSGSNQRSLLGRFAGLMTSNQRRPSSASNASTSQRPVDRNPPRINLMPTGANRVAMRNRGNNEADAALQALAQNGINMEDLRAALEAYIVWLRPIPLDIANALEGVGITPRFDNPEEAKVDNPLMNLSSALKRRLDA
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41627.7 | 385 | 10.71 | -0.647 | 59.11 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031759,IPR038342,IPR033743
Pfam: PF16847
SMART:
KEGG:
PRINTS: