Effector profile
| PlantPEAD ID: PlantPEAD00688 | Uniprot ID: L7NCR1 | Source: Article |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 4784 | Pathogen type: Oomycota |
| Species: Phytophthora capsici | Strain: | Other name: |
| Gene name: PcNLP6 | NCBI Gene ID: HM543172 | |
| Entry name: NLP6_PHYCP | Protein name: NLP effector protein 6 | |
| DOI: 10.1186/1471-2229-14-126 | ||
Gene/Protein information
Gene sequence:
ATGAGGTTTACCACCATCTTCTGGATCAGTCTCACGGTGCTTGCTACCGTCCGAGCGGAAGACGGTTCGCACGCTCAAAATGAAGTCCAAGCGGGAGACGGTTCTCACGTCCAAAATGAAGTCCAAGTCGGCTCCGAACCGCAGACTCAAGACTCTATTGAGACCCCCAAGCCTACTATCAAGTACATTGACTTCGGCGACTTGACGCTCTCTCCGTCAGCTAGTAGCCCAGCTAAGCGGAACGTAACTCTTCCCCCGGACACGACAATGAGGCCTGACCCCCGCCAAACTGAACCACCGACTGAAGCCCCAACACCCGCTTCGACGCCCGCCCCAACACCGGACCCTGGTCCATGGGTCGATAAGTGGATTGGCCACGATCAAGTAAAACCATTCCCTCAACCCGAGCCGGTCACGATCTCCGAAAAAGCTGGCGTAAAATTTAAACCTCAGATCCAAATTCGAACCGGGTGCGAACCTTACCCTGCTGTAAACGAGTACGGGGAGACTGGCGGTGGTTTAAAGACTACTGGTAAGTCCAGAGGCAACTGCGGAGGCTCTGGCTATGGTTCCCAAGTTTACGGTCGTTCAACGTGGATCCGAGGTGTCTGGGCTATTATGTACTCTTGGTACTTCCCGAAAGACTCGCCGTCGCCCAAAATGGGCCACCGTCATGACTGGGAGCACGCTATTGTATTCATTGACAACCCTGAGGTATCGGAGCCGAAGATTTTGGCCTGTTCTGTTTCTTCCCATGATGGCTACAAGAAGTACAACCCGTGTCCATCTTGGGTGATCGATGGTACCAGTCTCAAGGTCCGATACAAGCACGCCTGGCCATTGAACCACGACCTGGACGCTACAGGCGATGGCGGTAAATTCCAAGACTCGATCATGTGGAATCAACTGACGGAAGACGCTCGTAGAGCTCTCAACTCGGTCAGTTTCGGCAAGGCCAACACACCGTTCAATGACGGCAAATTTATGCCGAAAATTGAAAACGCCTGGCCGTTTTAA
Protein sequence:
MRFTTIFWISLTVLATVRAEDGSHAQNEVQAGDGSHVQNEVQVGSEPQTQDSIETPKPTIKYIDFGDLTLSPSASSPAKRNVTLPPDTTMRPDPRQTEPPTEAPTPASTPAPTPDPGPWVDKWIGHDQVKPFPQPEPVTISEKAGVKFKPQIQIRTGCEPYPAVNEYGETGGGLKTTGKSRGNCGGSGYGSQVYGRSTWIRGVWAIMYSWYFPKDSPSPKMGHRHDWEHAIVFIDNPEVSEPKILACSVSSHDGYKKYNPCPSWVIDGTSLKVRYKHAWPLNHDLDATGDGGKFQDSIMWNQLTEDARRALNSVSFGKANTPFNDGKFMPKIENAWPF
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37325.7 | 338 | 6.15 | -0.685 | 42.52 |
Plant infestation information
| Experimental plant: Capsicum annuum (related: pepper) | |
| Susceptible plant: Capsicum annuum | Disease name: Phytophthora blight of pepper |
| Host classification: Eudicots | NCBI Species: 4072 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG:
PRINTS: