Effector profile
| PlantPEAD ID: PlantPEAD00718 | Uniprot ID: Q87W65 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain ATCC BAA-871 / DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: HopAD1 | NCBI Gene ID: AE016853 | |
| Entry name: HOPAD_PSESM | Protein name: Effector protein hopAD1 | |
| DOI: 10.1073/pnas.112183899 | ||
Gene/Protein information
Gene sequence:
ATGCTTATCGGGCACAGCTTGCATCACATGCGACCCACTGCTGTGGATTCTAGCCTACCAACTTCCGCAACTAGCCAGACTATCAGCAATACCAAAAGTCGGCTGGATCCGCATCGTGTCCGTGAACTTACATTCATCGGAGTGGGTAGTAGTGTTGCCTACCTACTCAATGAGCTTAATGGTCGCTTTGCCGATAGCGGGGTAACAACGCCGTTTTTAGGAAAAGTCAGTATTGTAGGCAAGGACGACTCTTGGGCCGAGAATGTTCGTGGGAAAGGTTATATTAACCACCAGACTGAAATTATAAGCCAATGGGACCAACAGGTTCCAAAATATGATCCTAACTATGCTGCTCGTGCCGAATTTTCTGCGAGTAACCGAAGACAGTTGACGCGAACAGTGGAGTTAGGCGCAGAACATTTGAAAGCACAGGTAACAGGCATTTCGCGATTGGATGACGGTTGTTTTCGAATAAATCTGGACAATGGCCAGATTTTGCAAAGCCGACAGATTGTACTGGGGACTGGTGCCGGACCCCATACCAGTATCTGGAACAGCGTTACATCACACACTCAAGCAGAAAAACGACTGGACAACATCAAATTGCATGAGCAGAAAGCCTTGCGTGGCAAGGTGCTGGACCTGGATGAGTTTATGCGAGCGAGTGATGCCTCTCCCCAGACGTTTGCTGGAAAAACGGTGGTGATACATGGACCAAATGCAGGCATTGATGCAGCTGAACGTGCCGGGGAGCTTGGGGCAAATGCGGTTTGGTTTACCCGCAGTACGAATCCGGTATTGCTGGATGGCAATCAACTAAAATTCGCGCCAGAGCTGGCCAAAAGCGCTATACATAAAGTTGACAAATTAGATATTCGCCCAACAAAACTAGAGAATGGTTTCGCATTGCGACTACATTACAGTTCGCTAGGACAAGACTCACGGGAGCCAAAGAAGGTGCTAGATGCGGACTATTATGTGTACGCCATGGGTCAAGATATTCATAAGCCGGGTAGCGCAGCGGCCATACTAGGCAGTCTTCTTGACCACCTAGAACCTATATATGACTACGATCAAGTCTATAGCGACCAGCCTTTCAAGACAGTAATAGGCTTGCAAAGTCGCGGCTCCAATAGCGATAATGGTTTAATTATTGTCGGGGCGGCAGTTGCTCAGCTGGCCACTAATGTTCAGCATAGCTATAAGGACCACGCGTTGGATCGTATACTTGAGGAAATGACCAGGCTCCCCGAAAAGCAAACAGAAAAGCTATCACAAATGCTGTTAGAAGGTGCGCCATCAGTACAGATCCAGACATATCTAAAAACCTGGCAGTTAGATAGCGGTCAACCGCCAGATAAACAGGTACTGCAGAATCAAGTAGAAAACTATCTGGCGGCCCGAGACTACTTCCAGCGGCAAACCAACGAACAAAAGGGCAACCTGGACGGGGTTGCCGCAGAGGTAAAAAATCAAACCTTAACCGAGGTTGCATCGGTCATCGTGTCACCACAGTTAGGCACGATCAAGGCCTCCGCTGCAGCATTGTCGGGACTTATGCCAGCATATGTGGCTAACGGCGAAAATAACTTTACCACCGATAATCGAACTATGCTCCGTGCCGGCATTGCAGCAAGATATCCGAATATAGGTAACGCTGAAGCCAGTGCATTTATCGATGAAGTAGTAACTTTGCGTCACCTTAATAGTCAGCGTTTTATTGAGAAGGTAGCAGGCGAAATGATGGACAAAGGAGCTCAACCACTGGTGTCGTTACGCCCCCCGGTCCTAGGTGTCCCGGCGTCGGTCAGGACTGCTTATGAGGCTTACTTGCACGCGCTGAATTCTGGAGCGCACGATGGTACGCCGTTAAGTCAGCGCTGGCTGCCCAAAAAATAG
Protein sequence:
MLIGHSLHHMRPTAVDSSLPTSATSQTISNTKSRLDPHRVRELTFIGVGSSVAYLLNELNGRFADSGVTTPFLGKVSIVGKDDSWAENVRGKGYINHQTEIISQWDQQVPKYDPNYAARAEFSASNRRQLTRTVELGAEHLKAQVTGISRLDDGCFRINLDNGQILQSRQIVLGTGAGPHTSIWNSVTSHTQAEKRLDNIKLHEQKALRGKVLDLDEFMRASDASPQTFAGKTVVIHGPNAGIDAAERAGELGANAVWFTRSTNPVLLDGNQLKFAPELAKSAIHKVDKLDIRPTKLENGFALRLHYSSLGQDSREPKKVLDADYYVYAMGQDIHKPGSAAAILGSLLDHLEPIYDYDQVYSDQPFKTVIGLQSRGSNSDNGLIIVGAAVAQLATNVQHSYKDHALDRILEEMTRLPEKQTEKLSQMLLEGAPSVQIQTYLKTWQLDSGQPPDKQVLQNQVENYLAARDYFQRQTNEQKGNLDGVAAEVKNQTLTEVASVIVSPQLGTIKASAAALSGLMPAYVANGENNFTTDNRTMLRAGIAARYPNIGNAEASAFIDEVVTLRHLNSQRFIEKVAGEMMDKGAQPLVSLRPPVLGVPASVRTAYEAYLHALNSGAHDGTPLSQRWLPKK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 69252.1 | 632 | 6.85 | -0.389 | 31.95 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036188
Pfam:
SMART:
KEGG: pst:PSPTO_4691
PRINTS: