Effector profile
PlantPEAD ID: PlantPEAD00728 Uniprot ID: A0A172M473 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 143451 Pathogen type: Oomycota
Species: Plasmopara viticola Strain: ZJ-1-1 Other name: Botrytis viticola
Gene name: RxLR29 NCBI Gene ID: KX010959
Entry name: RLR29_PLAVT Protein name: Secreted RxLR effector protein 29
DOI: 10.3389/fmicb.2016.00709
Gene/Protein information
Gene sequence:
ATGCGTCGCACTGCTTTTATCGTGCTATCGCTTGTTGCTTTGATTGCCCCCTGCGTCACAAGCGTGGCTGTGGAAGACTTGGCTCAGGCCAACAATATCGAGACGAATGTGAATCCTAATGTTAAGGTCGGGAGCCGTCGCCATCTCAGGAGCGAGGCGAATGGCCGCCTTGCTGTTGTCGACGAAGAGAAAGTTTTTCGAGATTTTTGTGGACTTGGACCATGCTTTGATTGGTTAAAGCCGCAGAACTTGGGAGGATTCATCTATAAATTTGTGGAATGGGCCTCCAGAGATAGGGTAAATTTCAAGTTGAAAATGCTAAAACGAGAGCACCAGATTCCGATAAGAAAAAGAAATCAATAA
Protein sequence:
MRRTAFIVLSLVALIAPCVTSVAVEDLAQANNIETNVNPNVKVGSRRHLRSEANGRLAVVDEEKVFRDFCGLGPCFDWLKPQNLGGFIYKFVEWASRDRVNFKLKMLKREHQIPIRKRNQ
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
13767 120 9.94 -0.235 36.76
Plant infestation information
Experimental plant: Nicotiana benthamiana (no common name found)
Susceptible plant: Vitis vinifera Disease name: Downy mildew of grapevine
Host classification: Eudicots NCBI Species: 29760
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.