Effector profile
| PlantPEAD ID: PlantPEAD00736 | Uniprot ID: A0A182BSS0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 143451 | Pathogen type: Oomycota |
| Species: Plasmopara viticola | Strain: ZJ-1-1 | Other name: Botrytis viticola |
| Gene name: RxLR17 | NCBI Gene ID: KX010953 | |
| Entry name: RLR17_PLAVT | Protein name: Secreted RxLR effector protein 17 | |
| DOI: 10.3389/fmicb.2016.00709 | ||
Gene/Protein information
Gene sequence:
ATGCGTCTCTTCTACTTCTCTGCTATGTCCGTAATTGGGTTGTTAGCACGCAACAATATGGTTGTGGTTGCTTCGGATAAGCCGATTACGGCGGTCGAGACGCTAGGCAACCCCGTGCATCTGCACCACGAGGTGGTAGAAAGTGGCCTTGTGCGGTCGCTAAGAACTCGTGAAAAAGACATTCAAGACTCGACGGTTGCCAAAGACGATGCCATCAAAGTTGAGGAGGATAGGTCGTCGCTCATCCAAACGATCAACACGCCCCGATACGCGTACTGGTTTAGTCAACAAATGACTCCCCTAGATGTTCGTAGGGAGTTGCATCTGCCAGCGCATAAGCTGCAAGCTAAGCCCAGCAAAGTCTACAGTGGATACGTTGAGTACTACAACATCCATTGCAGCTTTTTCAAGTATCGCGATGAACCATTCTGCTGCGTTAAGGAATATTAG
Protein sequence:
MRLFYFSAMSVIGLLARNNMVVVASDKPITAVETLGNPVHLHHEVVESGLVRSLRTREKDIQDSTVAKDDAIKVEEDRSSLIQTINTPRYAYWFSQQMTPLDVRRELHLPAHKLQAKPSKVYSGYVEYYNIHCSFFKYRDEPFCCVKEY
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17288.8 | 149 | 7.75 | -0.329 | 43.3 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Vitis vinifera | Disease name: Downy mildew of grapevine |
| Host classification: Eudicots | NCBI Species: 29760 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: