Effector profile
PlantPEAD ID: PlantPEAD00750 Uniprot ID: D0NIN5 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 4787 Pathogen type: Oomycota
Species: Phytophthora infestans Strain: strain T30-4 Other name: Potato late blight agent, Botrytis infestan
Gene name: PexRD2(PITG_21422) NCBI Gene ID: DS028461
Entry name: RD2_PHYIT Protein name: RxLR effector protein PexRD2
DOI: 10.1105/tpc.113.120055
Gene/Protein information
Gene sequence:
ATGCGCCTCTCTTATGTGATCGCTGTAATTGCGGCTTCATTCCTGGTTACCACGGAAGCGCTCTCGACGAACACGGGTGTTCAGGCTGCTAATTTGGTAGGCCCAGCCCAGCGTCTACTGAGGAAACACTACACGGCAGCTGAAAACGACGATGACTCTGAAGCAAGGGCTCTGAATACAGAGAAGATGAAAACGATGTTGAAAGCTGGGATGACTGTTGACGACTACGCTGCCAAGCTAAAACTTACCGACAAGATTGCAGCTGCAGCTAACTCTGCAAGGGCGATGGAAAAGCTTGGCGAAACTCTCAAGATGAAGAAGCTCCTGCGGTACCTCAACTATGTGGCTGAACACACAGCAGTTTGA
Protein sequence:
MRLSYVIAVIAASFLVTTEALSTNTGVQAANLVGPAQRLLRKHYTAAENDDDSEARALNTEKMKTMLKAGMTVDDYAAKLKLTDKIAAAANSARAMEKLGETLKMKKLLRYLNYVAEHTAV
Protein structure:
PDB(X-ray)(3ZRG)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
13235.4 121 9.36 -0.107 14.97
Plant infestation information
Experimental plant: Nicotiana benthamiana (no common name found)
Susceptible plant: Solanum lycopersicum, Solanum tuberosum Disease name: Late blight
Host classification: Eudicots NCBI Species: 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
X5D843
Mitogen activated protein kinase kinase kinase
Solanum tuberosum (related: related: potato)
SRQMANAAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNVIMQEIDLLKNLNHKNIVKYLGSLKTKSHLFIILEYVENGSLANIVKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCLPPYYDLQPMPALFRIVQDDHPPIPDSLSPAITDFLRQCFKKDARQRPDAKTLLSHPWIQNSRRALQSSLRHSGTIRNIEEDGSAVREASNEDDKGAAGSSSSDKAKESSTTLAPPEVLETSKSEEVDGSSSFRIEERTDKIEDQFTSDPVPTLAIHEKSPVQNNADGLAVNKESALQSSTDLGEPDKVFANGELEFSESRGGNTVGRKVEEKGHGVNVYSASSSSGQKNTDYSPRKAVKTSVVPQGNELSRFSDPPGDASLDDLFHPLEKNLENRAAEVSLSASSSQIAQNNAIAETGKNDLATKLRATIAKKQMESESGPPNGGDLLSIMMGVLKEDVIDMDGLGFDDKLPTENLFHLQAVEFSKLVSSLRTDESEDVIVSACQKLIAFFHQRPDQKLVFVTQHGLLPLMELLEVPKTRVMCSVLQVLNLIVQDNTDSQENACLVGLIPVVMSFAAPDRPREIRMEAAYFFQQLCQSSPFTLQMFIANRGIPVLVGFLEADYAKYREMVHMAIDGMWQVFKLQRSTSRNDFCRIAAKNGILLRLINTLYSLNEAARLASASGGGVFPPDGLAPQPRSGPLDPGNSSFMQTEMPPYGTDQPDMLKIKNGDRVLPSGMQEPSRTSASHSPDSPFFRQDGERPRSSNATMEASGLSRLPDGNLVTKDRESLDRYKNDLFRAEIDLRQQRGGNTSRISTDRGSKQMEGASYGFPASTASQQENVRPLLSLLEKEPPSRHFSGQLEYHNLPGLEKHESILPLLHASNEKKTNGLDFLMAEFAEVSGRGRENTNLESLPRSPHKVATKKVGGVASTDGIASTSGFASQTASGVLSGSGVLNARPGSAASSGILSHMAPLWNADVAREYLEKVADLLLEFAAADTTVKSYMCSQSLLSRLFQMFNKIEPPILLKLLKCINHLSTDPHCLENLQRADAIKYLIPNLDLKEGPLVSQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMHFIMTSSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNESRKVEQALLKKDAIQKMVKFFECCPEQHFLHILEPFLKIITKSSRINTTLAVNGLTPLLVSRLDHRDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQNLIEERRDGQTSCGQVLVKQMATSLLKALHINTVL