Effector profile
| PlantPEAD ID: PlantPEAD00752 | Uniprot ID: W2N2K3 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4792 | Pathogen type: Oomycota |
| Species: Phytophthora parasitica | Strain: IAC_01/95 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: PpRxLR5 | NCBI Gene ID: KI693697 | |
| Entry name: RXLR5_PHYPR | Protein name: Secreted RxLR effector protein 5 | |
| DOI: 10.1094/MPMI-07-17-0158-FI | ||
Gene/Protein information
Gene sequence:
ATGCGGTTTTACTACACCCTGCTTGCAACTGCAGCCGCACTTCTGGTCCACAGCGATGCTTTATCGGCAGCAGCAGAAACTAGTCTGAACCAGTTGACAGCAGTCGATGGGACCACCACCACGAGTCAGCGCTTTTTACGTCGACACACCGATTCGGAAACTACGGACAACGAGGAACGGCTTAACTCGGGCCCCATCGTCCTCGATACCGCTAAGAAGATCGACGACTTATTCGAAGTCGAAAAGCTCGACAAAATTCTCGACCCCAAAATGGCCGACAAATTCCTGGATGGGAAGACGTTTTTTGGCTGGTTGGATAAGAGCGCACTTGATGAGGCCCTTAACGGGAACATCGCCCAGAAGACGAAAGTTTTCGAGCATTGGCGTGAGAAAAGATTGAGACCGAAGGCGTTAACCAAGGTCCTCACAACCGATCCCGCCGTAAGAAAGAAGTACAAGTTTGTCTACGAAATGTACGACAGCTACATCAAATACGTAGCACGGAAAAAACTTTCTGGTCTTAAGAGAAACAGAGGTGACTAG
Protein sequence:
MRFYYTLLATAAALLVHSDALSAAAETSLNQLTAVDGTTTTSQRFLRRHTDSETTDNEERLNSGPIVLDTAKKIDDLFEVEKLDKILDPKMADKFLDGKTFFGWLDKSALDEALNGNIAQKTKVFEHWREKRLRPKALTKVLTTDPAVRKKYKFVYEMYDSYIKYVARKKLSGLKRNRGD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20600.6 | 180 | 9.35 | -0.559 | 28.4 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Buckeye rot |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: