Effector profile
| PlantPEAD ID: PlantPEAD00764 | Uniprot ID: A0A1L5SB71 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4796 | Pathogen type: Oomycota |
| Species: Phytophthora palmivora | Strain: | Other name: |
| Gene name: REX2 | NCBI Gene ID: KX130350 | |
| Entry name: A0A1L5SB71_9STRA | Protein name: RxLR effector protein | |
| DOI: 10.1186/s12915-017-0379-1 | ||
Gene/Protein information
Gene sequence:
ATGCGTTTCTATTACGTCGCCCTCGCTGTAGTAGCCACGCTCCTGTGTTCCACCAATACTGTCAACGCAGACGCTGAGACGAACCAAATCACGCAAACGTCGGAGATCGTCGGTACAACCCAAGTTGGAGGTGCTGTGAAGCGCTTCTTGCGTACATCTGAGAATGGCGAGGACTCGTTCGACTCAACGGATTACAATGAGGAGAGAGGAAAAGGAGTCAACGTCAATGAGCTACTAAATCTTGCTCAAACTAAGAAAGGGGTCCTTCCGGTGGCCATGGACAATTTGGGTGAGAGTTTGCAAAAAAGGATTGTGAACATTATGCGTGACCAAGACATATCACAAAAGAGGTTCGCCTCGAAGCTGGGACTGAGTAGTGTCGACGACGTAGCAAACCGTAACGCAGATTTCTTTGCCGCATGGAAGGCCAACTTCCGAGTTGGAAAGAAGCCGAAGAAAATCCCCGAAGACTTCATAGGAGGTCGTTAG
Protein sequence:
MRFYYVALAVVATLLCSTNTVNADAETNQITQTSEIVGTTQVGGAVKRFLRTSENGEDSFDSTDYNEERGKGVNVNELLNLAQTKKGVLPVAMDNLGESLQKRIVNIMRDQDISQKRFASKLGLSSVDDVANRNADFFAAWKANFRVGKKPKKIPEDFIGGR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17867.2 | 162 | 8.68 | -0.407 | 27.23 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: