Effector profile
PlantPEAD ID: PlantPEAD00787 Uniprot ID: Q57530 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 1176649 Pathogen type: Bacteria
Species: Agrobacterium fabrum Strain: AKE10 Other name: Agrobacterium tumefaciens
Gene name: 6b NCBI Gene ID: D30626
Entry name: Q57530_RHIRD Protein name: 6b protein
DOI: 10.1371/journal.pone.0142128
Gene/Protein information
Gene sequence:
ATGACGGTTCCTACTTGGCAGGTTCGCGATCTTAGACGCATCCTACGAGTTAGTGAGTTGAGGCAACACTTGCGCCAGGCTCGTACCGATTTCAGATCCACCCTGTCACAATTCGTATACTTTAACCGCTCCGTTGTTAACCCAAATGCGTACGATGACGAGTATCTCCTTTCAGACCAGAGGCTCACCTATGTTTACGTCGATGAAGTAACAGCGCAATTGTGTGGTCTCAATCGCCTATTACCGTCCAACTCTCCGGCCTTCGGGACAGTAGCTACCGCAATGCCCCCATGGCTATTGGATCCACAAGAAATGAACGCAATCTTGCAACAGAGTTGCGGTCAAGGAGGCTTCGTTAATTACCACCACGGTCCGAGTACAAACAGCTTTTTTTTGGCGATCCTGATGAGCCAGTTGTTCATACGGATCAGGACTGATGTAATCCGCGGTCAAGGTTATGGTTGGTACGCCAGGCTAGGTAATTATGTTGAGGAAGGAGAGGATAACGAAGGTATCGAAAACGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAACGAGAGAGTTCCAATTATCCGATCTCATTCATTATCCCATTGTCGCATTGGGATCGTGCCATCTCACACGTTAG
Protein sequence:
MTVPTWQVRDLRRILRVSELRQHLRQARTDFRSTLSQFVYFNRSVVNPNAYDDEYLLSDQRLTYVYVDEVTAQLCGLNRLLPSNSPAFGTVATAMPPWLLDPQEMNAILQQSCGQGGFVNYHHGPSTNSFFLAILMSQLFIRIRTDVIRGQGYGWYARLGNYVEEGEDNEGIENEEEEEEEEEETREFQLSDLIHYPIVALGSCHLTR
Protein structure:
PDB(X-ray)(3AQ3)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
24042.9 208 4.76 -0.436 69.23
Plant infestation information
Experimental plant: Nicotiana benthamiana (no common name found)
Susceptible plant: Disease name: Crown gall
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q8VZI9
Trihelix transcription factor ENAP1
ENAP1
Arabidopsis thaliana (related: thale cress)
METTPETQSKTHRLPAGREDWWSEDATATLIEAWGDRYVNLNRGNLRQNDWKEVADAVNSSHGNGRPKTDVQCKNRIDTLKKKYKTEKAKPLSNWCFFDRLDFLIGPVMKKSSGAVVKSALMNPNLNPTGSKSTGSSLDDDDDDDDDDEEDDDDAGDWGFVVRKHRKVEDVDSSEGSAFRELARSILKLGEAFERIEGKKQQMMIELEKQRMEVAKELELQRMNMLMEMQLELEKSKLGKRRAASGKKL
Q9FFG0
Trihelix transcription factor ENAP2
ENAP2
Arabidopsis thaliana (related: thale cress)
METTTPQSKSSVSHRPPLGREDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNRVDTLKKKYKTEKAKLSPSTWRFYNRLDVLIGPVVKKSAGGVVKSAPFKNHLNPTGSNSTGSSLEDDDEDDDEVGDWEFVARKHPRVEEVDLSEGSTCRELATAILKFGEVYERIEGKKQQMMIELEKQRMEVTKEVELKRMNMLMEMQLEIEKSKHRKRASASGKKNSH