Effector profile
| PlantPEAD ID: PlantPEAD00812 | Uniprot ID: G3C9T1 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: strain Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: RxLL437 | NCBI Gene ID: HE574779 | |
| Entry name: G3C9T1_HYAAE | Protein name: RxLR effector candidate | |
| DOI: 10.1371/journal.ppat.1002348 | ||
Gene/Protein information
Gene sequence:
TCCCCAGCCGTCAGAAAGCCACCCCAGTCGACGTCGCCGGACTTATACCAATCCGCCCAGCTGGAAACTGACGACAAACGGATGCGTCAAAGGACCGACGTCACCAATCTGGCCGTCAGTGAAGAGAGGGCAGCGTTTGACGTTGGCCCGCCGACTGAAAAGGGCATTACCCGTCTGATATACAAGCTCAGGAATTGGCGTTGGGTCAAGGACCCGTGGGAGAAGCTAAAAAACTCAAAGCTGATGAGAACGCTAAGACGTTGGATAATCAAGAAGTGGAGATTGATCATGGGGGTGCCGGCAGGGAAGAAGTCCACGTTTGACGAAAAGGTTGTGACTGCTCAAGTGTTTGCTCACAAAGTGGCTTCACACGAGGACATGTACAAACAAGGAGGTGTCCGTCTAGAGCATGTCGCAGAAGGGCTGGGACTAACCAAGGACGACTTCAAAGCAACAGGTGTGGAGAAACTTGAGAAGATAGATAAATGGTTAGTTTACGAAACGTACAAGAAAAATATCGAGGAACTGGAGAAGGCCAAGAAAGTGTGA
Protein sequence:
SPAVRKPPQSTSPDLYQSAQLETDDKRMRQRTDVTNLAVSEERAAFDVGPPTEKGITRLIYKLRNWRWVKDPWEKLKNSKLMRTLRRWIIKKWRLIMGVPAGKKSTFDEKVVTAQVFAHKVASHEDMYKQGGVRLEHVAEGLGLTKDDFKATGVEKLEKIDKWLVYETYKKNIEELEKAKKV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21168.5 | 182 | 9.76 | -0.785 | 43.85 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: