Effector profile
| PlantPEAD ID: PlantPEAD00815 | Uniprot ID: G3C9T5 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: strain Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: RxLL446 | NCBI Gene ID: HE574783 | |
| Entry name: G3C9T5_HYAAE | Protein name: RxLR effector candidate | |
| DOI: 10.1371/journal.ppat.1002348 | ||
Gene/Protein information
Gene sequence:
ATGGAGCGTCGACTTCGGTCCGATTCTCAAGTCCAAACCGGAAAGGAGAATCAAAGCAGCGGTTCTCACACAGGCGCGGTGGGCCTCTCCAAATTGCAGGAAATGGACCCAAAAGAAGTGGAAAAGCAGGTTAGAACGGTCGTCACTAAACTGCCCCTTCCCCCGGGTTTCTCAGCTGACTCGATGGTCAAACTCACCATGGCGTCTTTAGGCAAGACCAAAACCGATCCCAAGTTTGCTGAACAAATGCTGCAGCAGACAGACAAGGCGCAGGAGAAGATGGAGAAGCGAGAGATAACGGGGATCGAGGATCTCAGCAAGATGGGGAAGAAGGCGGGCAAGGAAGTCGAGACTGGCGGTGCGAAGTGA
Protein sequence:
MERRLRSDSQVQTGKENQSSGSHTGAVGLSKLQEMDPKEVEKQVRTVVTKLPLPPGFSADSMVKLTMASLGKTKTDPKFAEQMLQQTDKAQEKMEKREITGIEDLSKMGKKAGKEVETGGAK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13365.3 | 122 | 9.33 | -0.894 | 49.61 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q8L4Q6
|
Neurofilament light protein
|
Arabidopsis thaliana (related: thale cress)
|
MDGGDDMDSLFEGMELFTPASQFSGDSKVSSPPQSEETKAAEATLITAPSQPDVTEATLITATSQPDITEALDENLFSDLTIVTPVQHQPEPMEAVITTHQSPAKNYGRQVSRRKKRAAGLRIGYGRHETNNLDEDEDDAVSQQSDSVSQVSDSVSQISDSVAQVFDSGNQSLDSPVVTVVVGNGSSRLELVKAQIEAKLNRSRDLAASVTSARKNAIRKKRQASENLRLASTTHEELEKQLEEAIETEDFDAAERISESLAAKERDRLALLALLRQAESDCDAIESKMEEVLLSQIAAEEESACLLRSFGTDAENDAGSILEKAEAFYSDEMEKWHSCSEDVEVRKVELDIESVVVDNVRLSLNGILEGSVEQDMKEKEILQKKKEHLANELEELLALVKAKEKEIDENDSQIEAVEERINNVVTGFKELQTSMDKMLNDVQAGLTEVDKETEDLSRKKKDVDEFMTSEKERGAKLRDLARVSADEACEYEEVIKLRKGLMSYVSKTREERAKLVNIEEKLSEEVQKLQEEVSSTRELLKERSSKKSIIQQNITSFMDKIMFIEKRMPELEAEKKVAASTRNFKEAGRIAAEAKSLNLEKDKTQMETGKANAELEKAEHEIEETIKRLQEIEKLILSKEKELAISRFQRLRIDSGTAKAERSAALELSDLEEANLLLEEAQEAESEAEKLKLTGGLKEEEEEEEKAKSNEVFVSMELIATVGLKKLQELVESVPS
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: