Effector profile
| PlantPEAD ID: PlantPEAD00840 | Uniprot ID: A0A1V0HHG8 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 189291 | Pathogen type: Nematoda |
| Species: Meloidogyne graminicola | Strain: | Other name: Rice Root-Knot Nematode |
| Gene name: MgGPP | NCBI Gene ID: KY113086 | |
| Entry name: A0A1V0HHG8_9BILA | Protein name: Effector protein GPP | |
| DOI: 10.1371/journal.ppat.1006301 | ||
Gene/Protein information
Gene sequence:
ATGACAAAAATACTTCTTACTTTATTTTTAACTACTGTAATATTAAATACAATCGTTGCAGAAATCAAAAAATATAAACCAGTGCATAATTGTCCAGAAATACCCTCAAATGGTCAAAAATATGTTTCTCCAATAAATACAAATACTAACGAAAAATTAGATCTACACTATCAAGATTGTGTTTTATGTCCATCTGATGTTAAGGAATGTTATATTCGTCCATTATTTACGCCACAAGAGACTGGGTTGGAGAAGTCTAATTATGGAAATTTTGAACAATATTTAAATAAACCAATAAAGAATGGAATTTTTTATTTTCATGCGTATAACGACAGTGATAAACATGCTTATGGTGGTGAATGTGGTCTAGGAGTAAGATATGCAATGCATGCTGCTGTTGGTGGAGCCTTCTTTTCCGGTGCAACAAAAAATTGGCCCCGTTCTGAATTGAATGATCTTTCATATCATTCTATACATGATGAAAAGGTTTGCATAGATATATGTGTCAAAATTGAATATGATAATAAAATATTAACAATTCCAGTTATGGATGAAACTGATTATTTACACGTTAATGAACTTGATTTATCTGAGGAGGCATTTAATTGGTTAAAACCTGATACATGGGCTCCACCAAAACCTGCTACAATTACTTATCTAAAATGTCCAAAATAA
Protein sequence:
MTKILLTLFLTTVILNTIVAEIKKYKPVHNCPEIPSNGQKYVSPINTNTNEKLDLHYQDCVLCPSDVKECYIRPLFTPQETGLEKSNYGNFEQYLNKPIKNGIFYFHAYNDSDKHAYGGECGLGVRYAMHAAVGGAFFSGATKNWPRSELNDLSYHSIHDEKVCIDICVKIEYDNKILTIPVMDETDYLHVNELDLSEEAFNWLKPDTWAPPKPATITYLKCPK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25546.2 | 224 | 5.74 | -0.369 | 36.68 |
Plant infestation information
| Experimental plant: Oryza sativa (related: rice) | |
| Susceptible plant: Oryza sativa | Disease name: Root-knot of rice |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: