Effector profile
PlantPEAD ID: PlantPEAD00842 Uniprot ID: M9T6Z2 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 31243 Pathogen type: Nematoda
Species: Globodera rostochiensis Strain: Other name: Golden nematode worm, Heterodera rostochiensis
Gene name: GrUBCEP12 NCBI Gene ID: JX308826
Entry name: M9T6Z2_GLORO Protein name: Ubiquitin extension protein Ubi-1
DOI: 10.1111/tpj.12125
Gene/Protein information
Gene sequence:
ATGAAGCATTTTGGGCTGATTCTTTTCTGGGTTGGCCTAGCGGGGCTGCTGCTGATGGCGATGCCGAGCTGTGATGGCATGCAAATTTTCGTGAAGACACTGACCGGCAAAACGATCACTTTGGAGGTGGAGAGTTCGGACACAGTTGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATCCCGCCTGATCAGCAACGGCTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGTTGGCCGACTACAACATTCAGAAGGAGTCTACTCTTCACTTGGTCCTTCGCCTCAGGGGCGGCATTGGTGGACATGGACCCTGCGAGTGCGAGAACCACTGA
Protein sequence:
MKHFGLILFWVGLAGLLLMAMPSCDGMQIFVKTLTGKTITLEVESSDTVDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIGGHGPCECENH
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
12578.6 114 6.04 -0.118 34.54
Plant infestation information
Experimental plant: Solanum tuberosum (related: potato)
Susceptible plant: Solanum lycopersicum Disease name: Tomato leaf mold
Host classification: Eudicots NCBI Species: 4081
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.