Effector profile
| PlantPEAD ID: PlantPEAD00845 | Uniprot ID: A0A3S7U9P5 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 6306 | Pathogen type: Nematoda |
| Species: Meloidogyne incognita | Strain: | Other name: Southern root-knot nematode |
| Gene name: MiMIF-4 | NCBI Gene ID: MG585324 | |
| Entry name: A0A3S7U9P5_MELIC | Protein name: L-dopachrome isomerase | |
| DOI: 10.1093/jxb/erz348 | ||
Gene/Protein information
Gene sequence:
ATGCCAATTTTACAAGTTTTCACAAACATTGCTTCAAAATCAATTCCATCAGAATTTTCAAAAGCAACGAAAATTATTGCGAATTTGACTGGGAAAAAAGAAGCTTCTGTAATGGTTCTAGTTAATGCTGGGAATGTTGGCTGTTTTGGAGGTTCTACCGATCCATTTATTTATGCCGAACTTCAATCAATTGGGGGATTTACTGATCCAAACAAAGTAACTGGGGAAATGACAAAACTTTTTACTGAACATTTTGGTGTTCCTGGTAGTCGAGTTTATATGAAATTGACTGGTCCTGATGCAAATCAAATTGCTTGTGATGGGAAATTAAAAGGATAA
Protein sequence:
MPILQVFTNIASKSIPSEFSKATKIIANLTGKKEASVMVLVNAGNVGCFGGSTDPFIYAELQSIGGFTDPNKVTGEMTKLFTEHFGVPGSRVYMKLTGPDANQIACDGKLKG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 11845.7 | 112 | 8.6 | 0.027 | 37.35 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Root-knot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001398,IPR014347
Pfam: PF01187
SMART:
KEGG:
PRINTS: