Effector profile
| PlantPEAD ID: PlantPEAD00859 | Uniprot ID: O42719 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: NL-88069 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: INF2B | NCBI Gene ID: AF004952 | |
| Entry name: O42719_PHYIN | Protein name: Elicitin | |
| DOI: 10.1094/MPMI-08-21-0201-R | ||
Gene/Protein information
Gene sequence:
CCAGGTACCATGAACACGAAGACTTTCCTCGCCATTTCCGCCGCCGCTGTCGTCGGCTTCGCCGCTGCTGAGACGTGCTCGCCCACGGACCAGACGACCGCGTACTCGACGCTGGCCAGCGTGCTGACCCTGAGCTCGTTCCAGGGTTGCGCTGATGACTCGGGCTTCAGCTTGCTGTACTCGACGGCGCTGCCGGACGACGCCCAGTACGTGAAGATGTGCGCTTCGGACAACTGCAAGTCGCTGATCGAGTCGGTGGCCGGCCTGAACCCGCCTAACTGCGATCTGACTGTGCCCACGAGCGGCCTCGTGCTGAACGTGGTAGACCTGACCAGCGGTTTCTCCAAGAAGTGCTCCTCGTCGTCGTCGACGTCCAACACGGCCTCGAGCGCCGCCACCTCGAGGACGACGGAGGCTCCTGCTGCGACGACTGCTGCCCCTACTACGGATTCGACGGCCACCGATGCCCCTGCCGCCACTCCCGCTGTCACCCCCGTTGCCACTCCCGCCGCCACCTCGACGAACTCGACGGAGTCCGTGACTCAGACTTCGGTGACCCAGACCACCGCGGCTTGCTAAGGCGCTAAAAAATGACATCTAGCGGCTGCGTACCGGTACTACTACAGTATATATCGTTTTTGGATGGGAACAGTTGAACATCCAAACTACGAAGTAATAAACACGAGTAACCTTTAGAAGCT
Protein sequence:
MNTKTFLAISAAAVVGFAAAETCSPTDQTTAYSTLASVLTLSSFQGCADDSGFSLLYSTALPDDAQYVKMCASDNCKSLIESVAGLNPPNCDLTVPTSGLVLNVVDLTSGFSKKCSSSSSTSNTASSAATSRTTEAPAATTAAPTTDSTATDAPAATPAVTPVATPAATSTNSTESVTQTSVTQTTAAC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18765.6 | 189 | 4.06 | 0.106 | 37.84 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR002200,IPR036470
Pfam: PF00964
SMART: SM01187
KEGG:
PRINTS: PR00948