Effector profile
PlantPEAD ID: PlantPEAD00865 | Uniprot ID: D0NPU9 | Source: Article |
Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
Gene name: PC2 | NCBI Gene ID: XM_002898857 | |
Entry name: D0NPU9_PHYIT | Protein name: Uncharacterized protein | |
DOI: 10.1094/MPMI-08-21-0201-R |
Gene/Protein information
Gene sequence:
CCTCATCGACAGCAAGTGAGATAATCCGCCTCGATCAATAATGCACTCGTCTCTTCTCGTCGCTCTTGCGTTGCTGGCGTCTCCCGCCATGGCCTCACACTACAAAGTGCACCACCACCACCACATGAAGTTTCGTGAAGTGACAGTCATCGCGGACAACGCTACGTGCCCCAATGGCGGCGACGTGTTGCTGTGTCAGAGCGCGTCATACGCGTGCCAGGACGACGGAACGGGCGCTCAGAAGTGTCTCGAGCGCGACGACTCGTTCCTGGACTCAGTGGATAGCAGCACTGCGATGCCTTGGATGCAGTGCAGCCAATCAAACGCGTCGCTGCCTTCCAAATGCCTCTTCGACTTCCAGTGCATCTGCATGGACTACGCCAACGTGGACTGCTACTGCTCACCGCCCGATGCCTGGCGCACGGGTCGCGCTACAGCTGACAACTGCACCACGTCCAGTGGAGAGGTGGGATCGTGTGATGAGGGCAAGTACTGCCGCACCAAGGGCTCGTACCAGGAGTGCGCTTCAGCCCCGTATCTGCCGAGCAGCACGTCGCTCTATAGCGACTGCTCGGACGACGGTGTGTGCGACTCAGGTCTCACATGTGATGACTACGACAACTTCGGTATCTGCGTTGAGGACGACGGAGAGGACGGAAGCGCCTAGATCTGTGAAGAGATCTTTATGAATGAGTGAACGTTTAGTGTTTGCAGTTGCAGACCTCAATTGCAGTGACTCTTCTTATATTAAAAATCGAGCTCGCTATCTTCCAGCAAAA
Protein sequence:
MHSSLLVALALLASPAMASHYKVHHHHHMKFREVTVIADNATCPNGGDVLLCQSASYACQDDGTGAQKCLERDDSFLDSVDSSTAMPWMQCSQSNASLPSKCLFDFQCICMDYANVDCYCSPPDAWRTGRATADNCTTSSGEVGSCDEGKYCRTKGSYQECASAPYLPSSTSLYSDCSDDGVCDSGLTCDDYDNFGICVEDDGEDGSA
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
22300.5 | 208 | 4.29 | -0.338 | 53.03 |
Plant infestation information
Experimental plant: | |
Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: pif:PITG_14439
PRINTS: