Effector profile
| PlantPEAD ID: PlantPEAD00867 | Uniprot ID: D0NCU6 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: SCR108 | NCBI Gene ID: XM_002903340 | |
| Entry name: D0NCU6_PHYIT | Protein name: Small cysteine rich protein SCR108 | |
| DOI: 10.1094/MPMI-08-21-0201-R | ||
Gene/Protein information
Gene sequence:
ATGAACCTCTCACTTTTTGTCGCTGCTGTCCTGTGTGTTGCGTTTCAAGCCGCCGAAGCCACCACGCACCTGCGTGTGCACATCCTGACCGAGTTGGCGAGCGCGGGCCAGCAGTGTGAATGGGTGAACAAGGCCGTCAAATGCGACGCTGCTACGTTCTGCCAGAAGTCTGACAAACACACCGGATTCTGTATGAAGAAGAAGCCTGGACTCAACGACCAGTGCGGCGGCAAGGGTGTGAACGGCCCGTGGTCTGTGACCTGCAACGCCACGAATCTCAAGTGTGTCCAGCAATCGAGTACGGTGAAAGCAAATATGAAGAAGCTTTTTGCTATCAAAAGTGGCAACTTTGGCGTCAAAAGGCGATGCGCCACTCTCACGACGCTGCTGCTTTCCATCCTGCTCGTTGCAGTCACCAGCACAAGCAACGCGGCGGCAAAGGAAGCAGCTTTCAATGCTTCCGATTACTGGGCCAAAGACCAACCGTACAAGTTTCAACCACAGTGGACTCGTCTTCCGGATGGGAAAGTTGTGGCGAACAATGGCTCAAACTTCAGCAACTTTACAGAGTACCGTGGTGCGGTTGAAGCCAAAACCCCGAGATTTTGA
Protein sequence:
MNLSLFVAAVLCVAFQAAEATTHLRVHILTELASAGQQCEWVNKAVKCDAATFCQKSDKHTGFCMKKKPGLNDQCGGKGVNGPWSVTCNATNLKCVQQSSTVKANMKKLFAIKSGNFGVKRRCATLTTLLLSILLVAVTSTSNAAAKEAAFNASDYWAKDQPYKFQPQWTRLPDGKVVANNGSNFSNFTEYRGAVEAKTPRF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21922.2 | 202 | 9.49 | -0.163 | 16.87 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: pif:PITG_09793
PRINTS: