Effector profile
| PlantPEAD ID: PlantPEAD00886 | Uniprot ID: Q4VKJ0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: Emwa1 | Other name: Peronospora arabidopsidis |
| Gene name: HaATR1 | NCBI Gene ID: AY842884 | |
| Entry name: Q4VKJ0_9STRA | Protein name: Avirulence protein | |
| DOI: 10.1094/MPMI-08-21-0201-R | ||
Gene/Protein information
Gene sequence:
ATGCGCGTCTGCTACTTCGTTCTCCTGCCTTCTGTTGCTCTGGCCGTCATAGCCACCGAGTCGTCGGAAACGTCCCGCACGATCGTCCACGTGTTCCCCCTCCGTGACGTCGCCGACCATCGCAACGACGCTCTAATCAATCGGGCGTTGAGAGCGCAGGCAGCTCTCGATGACGATGAAGAGAGATGGCCGTTCGGGCCTTTGGCCGTCAAAGCGTTGATTAGAACCATCGACAGCCATAGAGCCGGCTTGAATGATGATGAGGCTAAGATGAAGGAGGTCGTACAAACCTGGAACAAACTAATCGAACGGGATAATTTGATTGACGAGATAGGAAAACATTATAGTAAAGCGCCGGGGCCAGTCTATGATTCCTATGATGAAGCTCTCGCCACTATGCTAGTAACAACCTATTCGTATCGCGGAGTAGCTCGGGCAATTCTACATCCAAGGCCTTCGGACCCAATTTCGAATAAGGCAGGGCGAGCGCACCGATTGGAGGAAGCAGTGGCATCACTATGGAAAGAGCGAGGATACACCTCACACAATGTCGTTTCAAACATTGCTACCGACGACGATGTTGACTTTTTCGCATCCACGGCCTTCACTTTCCTAGTAAAGTGTGTCGAATCTGAGGACGACGCGAACAACGCCATATTCGAGTATTTTGGTAGTAATCCCAGCAGATACTTTTCCGCTGTGCTGCACGCGATGGAGAAGCCTGGTGCTGATATTCGAAAGCTTGAAAACAGCAAAAAATGGATGTTTCGATTATATGCGCAAGCGCCGGAGCCGTTCTCTCCACCAGGTTTTGAATGGGCCCTGGCTCGTTTCCAGGATGAAGACCATGCGTTTGTTGGTGCACAGAACGACTACAAGAAGCTCAGCCCCTCTCAAATCGAGAAACTCGTGGAAGAGTATTCGGGAATATATTCTGTAACATCTCGTAACTTCGTAGGGCGCGCGAGCGAGTAG
Protein sequence:
MRVCYFVLLPSVALAVIATESSETSRTIVHVFPLRDVADHRNDALINRALRAQAALDDDEERWPFGPLAVKALIRTIDSHRAGLNDDEAKMKEVVQTWNKLIERDNLIDEIGKHYSKAPGPVYDSYDEALATMLVTTYSYRGVARAILHPRPSDPISNKAGRAHRLEEAVASLWKERGYTSHNVVSNIATDDDVDFFASTAFTFLVKCVESEDDANNAIFEYFGSNPSRYFSAVLHAMEKPGADIRKLENSKKWMFRLYAQAPEPFSPPGFEWALARFQDEDHAFVGAQNDYKKLSPSQIEKLVEEYSGIYSVTSRNFVGRASE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36532 | 324 | 5.45 | -0.385 | 41.95 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048935
Pfam: PF21421
SMART:
KEGG:
PRINTS: