Effector profile
| PlantPEAD ID: PlantPEAD00896 | Uniprot ID: U9V5V1 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: strain DAOM 181602 / DAOM 197198 / MUCL 43194 | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: SIS1 | NCBI Gene ID: KI274894 | |
| Entry name: U9V5V1_RHIID | Protein name: Ricin B lectin domain-containing protein | |
| DOI: 10.1111/mpp.12682 | ||
Gene/Protein information
Gene sequence:
GTAAAAAATCAATAAAATGAAATTTATCTTACTTTTACTTTTCCTTCTTTTAAACATCCTTACTGATGTTGCTCAAGGAATCGTTATAATACCAACTAAAATTCAATTAAGTAATAGTAATCTTTTTTGGGCATTAGATGGTTCTAATGTTATTTTAAGCCCAAATGGTATCAAATGGGCAATTTATAACAATGAAATCTCACCTTATGGTAATGACACGGTCGCCGTCCAATACCAAGGTCCTGGCAAACAACTCGCTATAGCAAATAAAGGTGGACCTGTTGAAATATTGGAAAAATGGGATGTCGGAAGCATTATAGAACCTCAAATTATTCCCAATGTTACCATTTGTTCCATACCAGTCCCTAGTGAATGTGCAACAGCAGATGGAATGAAAGTTATTGCTAATGATAAACATACTGCTGGTGACCCTAATCAGTTGTGGACATTAGAGAGTCATTTTTAATTATTTTAAATGTACAATATTGATAAAATATATAGTGTGGGCATTTTGTATAGTATATAGCGTAGATGTGTAACTTGCATCAAAAAAAAATAAAAATAAAA
Protein sequence:
MKFILLLLFLLLNILTDVAQGIVIIPTKIQLSNSNLFWALDGSNVILSPNGIKWAIYNNEISPYGNDTVAVQYQGPGKQLAIANKGGPVEILEKWDVGSIIEPQIIPNVTICSIPVPSECATADGMKVIANDKHTAGDPNQLWTLESHF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 16208.8 | 149 | 4.77 | 0.246 | 32.56 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: NONE |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: