Effector profile
| PlantPEAD ID: PlantPEAD00912 | Uniprot ID: Q8WRU9 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 6306 | Pathogen type: Nematoda |
| Species: Meloidogyne incognita | Strain: | Other name: Southern root-knot nematode |
| Gene name: Crt-1 | NCBI Gene ID: AF402771 | |
| Entry name: Q8WRU9_MELIC | Protein name: Calreticulin | |
| DOI: 10.1111/nph.14946 | ||
Gene/Protein information
Gene sequence:
GGTTTAATTACCCAAGTTTAAGATTTAAAAACTTTAAATTCTAAAAAATCGTTGTTTGTATTCAACAGTAAGAATGGTGAGCAGGTTTTGTTTTGTATCCTTGCTGATAGCTTGTTGGCCAATTTTTGGAGTTTTTGGGGAAGTTTTCTTCAAGGAGGAATTTTCAGATGAGTCTTGGACTGATCGATGGATTCAATCTAAACATAAGAGCGACTACGGAAAATTTGAGCTTTCTTCTGGAAAATTTTTCGGTGACAAGGAACGCGATCAAGGCCTTAAAACTTCTCAAGATGCTCGCTTCTATAGCATCTCTGCCAAATTCCCAAAGAAGTTTAGCAGTAAAGGAAAGACGTTGGTAATCCAGTTTAGCATCAAACATGAACAGGAAATTGACTGTGGTGGCGGTTATCTTAAACTCATGGCCTCAACAATTAATCAAGAGGATTTCCATGGGGAAACACCTTACCACCTTATGTTTGGCCCTGATATTTGCGGACCTGGAACGAAGAAAGTTCATGTCATCATTAATTATAAGGGCAAGAACCAGCTCATTAAAAAGGATATTCGATGCAAAGATGATGTTCTTACTCATTTGTACACGCTTATTCTCAATCCAGACAACACCCATGAAGTCCAAATTGATGGAGAGAAGGCAGAAAGTGGAGAGCTTGAGGCTGATTGGGAGTTGTTGCCGGAAAAGAAAATTAAGGACCCTGATGCTAAGAAGCCTGAGGATTGGGATGAGACTGAATACATTGATGATCCTGAAGATAAGAAACCCGAAGATTGGGACAAGCCTGAAACTATTCCTGATCCAGATGCGAAGAAGCCAGAAGACTGGGATGATGATATGGACGGAGAATGGGAGCCACCAAAAATTGATAACCCAAATTATAAAGGAGAATGGAAACCCAAGCAGATTAAGAATCCAAACTACAAAGGCAAATGGATCCACCCAGAAATTGACAACCCTGATTACAAAGTCGATGATGAACTCTATATGCGTGAAGATTGGGGCTCTGTTGGTATTGACATCTGGCAGGTTAAATCTGGTACAATCTTCGACAATATTATTGTGACTGACAGCATTGATGAAGCAAAGGCTCATGCGAAGGAAACATTTGAGCCATTGCGCGATGCTGAAAAAAAACAAAAGGAGGCTGCAGATGAGGAAGAACGCAAGAAGTTTGAGGAGGAAGAAAAGAAACGTAAAGAGGAAGAGGAATCTAAAAAGAAGGATGAGGATAAGGATGGTGATGAGGAAGAAGATAAGGATGAGGAGGAGGAAAAGAAGGTGGAAGAGGAGCATGATGAGCTTTAAATGAAAGACGAAGGATATATATTTAAAAGAAAAAAGGTTCACTTTTGCTCGTAATAAAATTATAAAATAATTATAAATGGGGGGATTTGCTGCCACCTTTGCCTATTTTTTGGGGGTTTATTTTTCTCTATCATTTAAAATTAGTTTTTTTCTTAAGATTATTTTTTTTAATTCATTTGTTTTCTCTCTCTCTTTCCCAACCAAAAAAATACCGCACATTTTTTGACTATTAT
Protein sequence:
MVSRFCFVSLLIACWPIFGVFGEVFFKEEFSDESWTDRWIQSKHKSDYGKFELSSGKFFGDKERDQGLKTSQDARFYSISAKFPKKFSSKGKTLVIQFSIKHEQEIDCGGGYLKLMASTINQEDFHGETPYHLMFGPDICGPGTKKVHVIINYKGKNQLIKKDIRCKDDVLTHLYTLILNPDNTHEVQIDGEKAESGELEADWELLPEKKIKDPDAKKPEDWDETEYIDDPEDKKPEDWDKPETIPDPDAKKPEDWDDDMDGEWEPPKIDNPNYKGEWKPKQIKNPNYKGKWIHPEIDNPDYKVDDELYMREDWGSVGIDIWQVKSGTIFDNIIVTDSIDEAKAHAKETFEPLRDAEKKQKEAADEEERKKFEEEEKKRKEEEESKKKDEDKDGDEEEDKDEEEEKKVEEEHDEL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 48595.8 | 415 | 4.67 | -1.189 | 35.63 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Root-knot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001580,IPR018124,IPR009169,IPR009033,IPR013320
Pfam: PF00262
SMART:
KEGG:
PRINTS: PR00626