Effector profile
| PlantPEAD ID: PlantPEAD00914 | Uniprot ID: A0A1D8GZE3 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 6306 | Pathogen type: Nematoda |
| Species: Meloidogyne incognita | Strain: | Other name: Southern root-knot nematode |
| Gene name: Sp12 | NCBI Gene ID: KU737535 | |
| Entry name: A0A1D8GZE3_MELIC | Protein name: Effector protein | |
| DOI: 10.1111/nph.14946 | ||
Gene/Protein information
Gene sequence:
CATCAAACAATCTCCTCAACAACTAATAAACTCAAAAAACACCCCAAAACAACCCTAAAAACAACCCAAAAATGTCCATCTTCCTTACTTCTGCTCTTCTAATCATTTCAATAATCGCTATGACCGAGGGTGCAGGCGATCGAAGCGCTTCAACCTCTACTGGTTGTACAACCTATTTTGGCATGCTTGATCATGCGGATACCAAGGAAAATAACAAAAGAAAAACTTTCAAACCCAACGATAAAACCAAATCCAACACCTTGCAAGTGACTGGTGGGGCAATGTTCAGCAATACCTCGGTGGCGTTGGTTGTCGGTGATAAGGCGTTATGTATGGCTAAGACAGGAAGTTCAGACGATTGGGGAATGCGCTACGATGCTTTGACTGGAACAATGAAATTTATCATTTCTGATAATATTACTGTTGAAGTGGGTGTGGGTTTATATAATTGGTGCCAGACAAATGGAAAGGCCCCTGTCACTAACATACCATCCGGAGCGTTCATGTTGCCCCGGAAGTAA
Protein sequence:
MSIFLTSALLIISIIAMTEGAGDRSASTSTGCTTYFGMLDHADTKENNKRKTFKPNDKTKSNTLQVTGGAMFSNTSVALVVGDKALCMAKTGSSDDWGMRYDALTGTMKFIISDNITVEVGVGLYNWCQTNGKAPVTNIPSGAFMLPRK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15935.3 | 149 | 8.81 | -0.081 | 22.71 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Root-knot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: