Effector profile
| PlantPEAD ID: PlantPEAD00916 | Uniprot ID: Q86RQ1 | Source: Article |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 51029 | Pathogen type: Nematoda |
| Species: Heterodera glycines | Strain: | Other name: Soybean cyst nematode worm |
| Gene name: CLE2 | NCBI Gene ID: AF473827 | |
| Entry name: CLE2_HETGL | Protein name: CLAVATA3/ESR (CLE)-related protein 2 | |
| DOI: 10.1111/nph.14946 | ||
Gene/Protein information
Gene sequence:
ATGCCAAACATTTTCAAAATCCTTCTGATTGTGCTTTTGGCCGTCGTCTCATTCCGCCTCTCGGCTTCTACTGGTGACAAAAAAACTGCTAATGATGGGAGTGGAAACAACTCATCAGCTGGGATTGGTACGAAGATCAAAAGAATTGTCACCGCTGGACTGCTCTTCACTTCCCTGGCGACGGGTGGGGCGGAAGCGATTGGGCGAAGCAATGCTCAGGGAGGAAATGCCGCCGGATTGGTGCCATCGCATGTGACCAATCGCTCAATGGCTCCACCACCTCCTCCTGTGCAATTTGAAATGGGGGCAAATCGATTAGAAAAAATGAGGGCACACCTACGCGAACTTGCTGAGAAAATGCCGGTCAATGAATCGAAGCGTCTGTCACCGAGTGGACCCGACCCTCATCATCATTAG
Protein sequence:
MPNIFKILLIVLLAVVSFRLSASTGDKKTANDGSGNNSSAGIGTKIKRIVTAGLLFTSLATGGAEAIGRSNAQGGNAAGLVPSHVTNRSMAPPPPPVQFEMGANRLEKMRAHLRELAEKMPVNESKRLSPSGPDPHHH
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14455.6 | 138 | 10.42 | -0.214 | 46.43 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Glycine max | Disease name: Soybean cyst |
| Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: