Effector profile
| PlantPEAD ID: PlantPEAD00918 | Uniprot ID: Q8XVD4 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: RSc2897 | NCBI Gene ID: AL646052 | |
| Entry name: Q8XVD4_RALN1 | Protein name: Type III effector protein | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGTCCAGGACCCTCGCCACCCCCCGCACGCCGCAAGGCAACGACAGCCTGTTCGCCAGCTATGAGGCCATTGCCAGCCTGTCGACGGAGATGGTCGAGGCGGCCGAGGCCGGGGACTGGGCGGGCGTGAGCGCCCTGGAGCGCGAGTGCGCACTCTATATGGAGCGGCTCGGCCGCACGCCGTCGCGTCCGGTGCTGTCCGAGGCGGAGCTTCGGCGCAAGCGCGACCTGATGATGCGCATCCTGGCCAACGACGCCCGTGTCCGGGCGCTGGTCTGCCCGCGCCAGGACCAGCTGCTGCGTCCCATGGATGCCGCGCGCCGTTCGATCGGCGCCCGCCAGGCCTACGCCGCCGTTTCCTACTATTGA
Protein sequence:
MSRTLATPRTPQGNDSLFASYEAIASLSTEMVEAAEAGDWAGVSALERECALYMERLGRTPSRPVLSEAELRRKRDLMMRILANDARVRALVCPRQDQLLRPMDAARRSIGARQAYAAVSYY
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13608.6 | 122 | 9.18 | -0.337 | 60.23 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008622
Pfam: PF05400
SMART:
KEGG: rso:RSc2897
PRINTS: