Effector profile
| PlantPEAD ID: PlantPEAD00944 | Uniprot ID: Q8RP05 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. maculicola strain ES4326 | Other name: |
| Gene name: HopPmaK | NCBI Gene ID: AF458049 | |
| Entry name: Q8RP05_PSEYM | Protein name: Type III effector HopPmaK | |
| DOI: 10.1126/science.295.5560.1722 | ||
Gene/Protein information
Gene sequence:
ACCGAGAAAGCGCCTTTTCTTCGAGTCCGTCGAACGCTACATGCAGTGCGTTGAGTACCAGAATCCCCGCCAACAACCTAGTCAAGCGCACTGCCAGCAACCACTTCAGCATGGAACTCTTCGCAAGGTCATGACCACGTAAGCGGTGACTTTTCAGGTCCAACCCCAACAGTGCGTGGAGAAGAATGAACGGTAATCAGGCTCGAAATGATATTGACGAATGGCTAAAAACAGCCGCCTGCATCAAGCATCCTGCAGGTTGCGTTGATCAGGATGGTCACAGCGCTTTCTCTGACAGAGAGGGCAACCTGTTCCAGTTGGCGGTTCCGGACGCTTTTTCAAGTCTTCATTTGTACGGCACTTTGCTTGAGCTGCAGCCCGCTGTCGATGGTCGAGTGCTCGCTTCAGCACTGGCCATCAACGCTCAGAAAAATGTACTTCGGGGAAGTGTCATTGCACTCAATACGGAGAACCAAGAGCTGTTCGTGCACCACACAGTGACCTTGGAATCATTAGATCGTGTGGCGCTGTGGCAAACACTGGACAACTTCGTAGCGCTCACACGAGAACTGAGGTCGGCACTTCGATCTCAACCTGTTCCAGCGGCAAAAATTGAATCAACGCACTTCAACCATCTCAGAAGAGGGTTCTAATATGGACGTCCGATCGGCTCCATCAAACCACGCAACCGCCGTGCCCACAGCGCAACCTTCAGCGCCCTCAATAAAATCAACGCTCAGCAAGCTTTTCAGAGCGCAGTGCTCAGACCCCGTGCCTCTATCGTCATCGTCATCGACAGAACGAATAGCACCGCCTCGCGTCACCGCAAACTATTCGGCAGTGGTTGATATCTCGAAAACGGCGAGCCACTCAAAAACCAACGCGGACACCGCAGAAAAAAATAGCTTTTCCTGGTTAAAAAACAAGCTATCAACTGTTTCAGAAAATCAGCAAAAAAAACAGGCGATACAAAATTTTATTGCCCAGGTGAGCCAGCAGTATAACGTCGAAGAAGACGTCGCTAAACTTGCTGTCGCTGCTTCGGGAGCTTATAGACAACTCCGTTTCGAAGAGACGCAACAACAGCGGGTACATGCCTGCCTGCAAGACACTGAAGCGCTGACAGCGATGATTGATCTTGCTACACGTAAGCCACTGACCTATAAAATGGTCATGGGACTTGATAGTAGCGACTGCTCATTTGACCCCATCGCGCGAATTTCCGACCATGACATTTTGACTGAAGCCGAACAATGTCAAGTGGTACGCAGTGCATTTGCATCGGCTGACAAGGTATGCGTGGTAACCAGCTACGGAATCAAGCCGCTAGGAGCTCCAAAAAGCGATGCCCTGTCGCCGACCATAGCTTCCGTACTACAAGGTTTTGCCAGCAAGCAGCACGACAAAGACTTTACCGGTGTGTTTTTCTACCAGAAAAGCGATGCTATTCAGAATTACTACACCGAAGATAAGCGTACCAATATCAGCATCAAGGAAAACGACTGGGCCAAGGCAGTTACACTTTTCAATGCGGCAGTGGAACGTGGCGAAATCGAAGGCCCTAAGGAAGGTCTGAAATAGGCAGACGCTTTTAATCCATCCGTTGTTTCAGGGTTCAAAAAACGTCGATTCAATCAAAAATCAGGCCTTTCCCACACTCAGCGCCTCTTTTTTCTGCGAACAAGCACTTTTCAGCGCTCATTGGCCGCATTACAGGCGCACCTCTCCTGCATTCAGCAATCGTTTTCGCACCATCCACAGGTTTGACAGAGCAAACATCGTGGTCTGCTGCGCGTTGTTTTTCGCCAGACCACGAAAGCGCACTTTCGTATAACCAAACTGGCGCTTGATCACGCGAAATGGATGTTCAACCTTGGCACGTACCTGGGCCTTCGCGTATTCGATTTTGCGACGCATGCGCCCGATCAGGCTTTTCTTTGCATGCTTTTTATAACTGCTCGGCCGCGCTG
Protein sequence:
MDVRSAPSNHATAVPTAQPSAPSIKSTLSKLFRAQCSDPVPLSSSSSTERIAPPRVTANYSAVVDISKTASHSKTNADTAEKNSFSWLKNKLSTVSENQQKKQAIQNFIAQVSQQYNVEEDVAKLAVAASGAYRQLRFEETQQQRVHACLQDTEALTAMIDLATRKPLTYKMVMGLDSSDCSFDPIARISDHDILTEAEQCQVVRSAFASADKVCVVTSYGIKPLGAPKSDALSPTIASVLQGFASKQHDKDFTGVFFYQKSDAIQNYYTEDKRTNISIKENDWAKAVTLFNAAVERGEIEGPKEGLK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 33636.8 | 308 | 6.96 | -0.42 | 38.57 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: