Effector profile
| PlantPEAD ID: PlantPEAD00945 | Uniprot ID: I0BVV6 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: PSa1-3 | Other name: |
| Gene name: HopPtoA1Pma | NCBI Gene ID: AF458051 | |
| Entry name: I0BVV6_PSECA | Protein name: HopPtoA1Pma | |
| DOI: 10.1126/science.295.5560.1722 | ||
Gene/Protein information
Gene sequence:
CGGGTTTTGAACTAACACTCTGAAGTAAGGCGCGTGGCATGGTTTTATTACAGTTGTGCCATCTCCCTGATGTTAGCGCCAAAAAAAAGGGGAACCCGCAACGGAGGCGCGACCACTCAGCCTTGTCGGTCCTGTCCACTGACGGGCATCCGGACGTTCGCAATCCCCATCGCTATTGGATCGACGCCTTATTGTCTTGCCTGTACGCAAGCAAGTCGTCCGGTTAAGCCCATCTCAGCGCGTTGCTATCAAACATCCGCACACAGAGAGGGAATTTCCATGTACATCAACCGCTCCATCAGTTCTCAGTCCAGTATTGGCACGGAGAGCTTCCATTCTGCGCAGTCTGTTGCCTCCAGTTCGGTCAGGGTGCTCAGTGAGGCCGAGCAGACCAAACTGAATGACATCACCCATTACCTGACAGATCATGTATTCGCCGCACACAGGTTACCGGTAAACGATATCAACGTTGATCAGGATGTCGTTCATGCCCACAACGTCGAGATCGGCAAAATAATCAGCGCCCGTGCCCTACGCTTGCTTGATGAGGGCGAAACCGCTCTCAGCATTGGCGAAACCTTTGCCAAGGCAGAGAAGTTCGACCGCATGGCAAGTGCGGCCTCGGGCGCTTTAAGGGCAACACCGTTCGCCGCGGCGTCCGTGCTGCAATACATGCAGCCTGCCATCAACAAGGGCGACTGGTTACCGACGCCGCTCAAGCCCTTGGCCCCGCTCGTGTCCGGCGCCCTATCGGGCGTCATGGACCAGGTCGGCACCGGCGTCATGAACCGCGCGACCGGCGACCTGCATTACCTGAGCACTGCGCCGGAAAAACTGCACGATGCGATGGCTGCCTCGGTAAAACGCCATAAGCCGGGTGTCATGCGTCAGGCTGCGGATCTGGGGATCGCCGTTCAGACCTACACGGCGCGAAATGCGCTGCGTACCGTGCTGGCTCCTGCACTGGCCTCCAGACCTGCAGTGCAGGGTGCGGTAGACATCAGCGTGTCGGCCGCGGGTAGCCTGGTTGCCAACGCAGGTTTTAGCGAGCGCATGCATACGGTGCAGGCGCGTGATCACCTGCGTGGCGGTGCCTTTGTACTCGGCATCAAGGACAAACAACCCAAGGCAGACTTGAGTGAAGAAACCGACTGGCTCGATGCCTACCGGGCGATCAAATCCGCCAGCTACTCCGGTGCAGCGCTCAACGCTGGCAAGCGTGTCGCGGGTCTGCCGCTGGACGTCGCCACCGATGGTTTGAAAGCGGTGAGGAGTCTGGTGTCGGCCACCAGCCTGATGCAAAACGGTCTGGTAATGGCGGGTGGTTTTGCCGGTGTGGGTAAGTTGCAGGAAATGGCGACGAAAAATATCACCCACCCGGCAACCAAGGCAGCCGTCAGCCAACTGACCAATCTTGCAGGTTCAGCCCCGGTTTTTTCAGCCTGGACAACGGCAGCGGTGGCGACGGACCCAGCGGTGAAAAAGGCTGAGTCGTTCTTGCAGGACACGGTGAAAACAACGGTATCCAACGGGACCAGCGCGCTGGCCGACAAAACCGTCAAGCTGGCCAAGGCGGGCATTGACGCGAGCGCCGAAAGGATTGCCACTACCGGGGCGTCCTTGCGTGACACCTTGCGCCGTCGCACGGTGCGTGAGCCTGATATCGAGGAGGGCGGTGTTGCCGCGGGCACGGGTTCGCCGGTTGCAGTGCCTTTCGAGGCAATGCGGCCATAGGCATTTCGGCGGATTGCCTGTAACAAAAAAAGGAGCGTACTCCAAAGACTACGCCCCCTTTCTTTTACCCGTATTTACCTCGGATCAAAGTTCGGTGTGC
Protein sequence:
MYINRSISSQSSIGTESFHSAQSVASSSVRVLSEAEQTKLNDITHYLTDHVFAAHRLPVNDINVDQDVVHAHNVEIGKIISARALRLLDEGETALSIGETFAKAEKFDRMASAASGALRATPFAAASVLQYMQPAINKGDWLPTPLKPLAPLVSGALSGVMDQVGTGVMNRATGDLHYLSTAPEKLHDAMAASVKRHKPGVMRQAADLGIAVQTYTARNALRTVLAPALASRPAVQGAVDISVSAAGSLVANAGFSERMHTVQARDHLRGGAFVLGIKDKQPKADLSEETDWLDAYRAIKSASYSGAALNAGKRVAGLPLDVATDGLKAVRSLVSATSLMQNGLVMAGGFAGVGKLQEMATKNITHPATKAAVSQLTNLAGSAPVFSAWTTAAVATDPAVKKAESFLQDTVKTTVSNGTSALADKTVKLAKAGIDASAERIATTGASLRDTLRRRTVREPDIEEGGVAAGTGSPVAVPFEAMRP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 50520.4 | 484 | 9.17 | -0.036 | 40.34 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: | Disease name: NONE |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: