Effector profile
| PlantPEAD ID: PlantPEAD00946 | Uniprot ID: A0A3M3QCU9 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: ICMP 15203 | Other name: |
| Gene name: HolPmaN | NCBI Gene ID: AF458391 | |
| Entry name: A0A3M3QCU9_PSECA | Protein name: Type III effector HopAB2 | |
| DOI: 10.1126/science.295.5560.1722 | ||
Gene/Protein information
Gene sequence:
GATCCGCCGCCATGAAATTGAAAAAGGTGACCAGACATGGTGGGTAGTATCAACAGAGCCGGGCCATCTGGCGCTCCTTACGGGCACACCGCCCCCGAACCAGCACCAGAGCGCGCACACGAATCCGGCAGCGGTGCCAGCTTCTCGAACAGTCCGCAGTTGCCGGCGCACTCTTCGGATGCGCCCACATCACAGGCGCGAGATCGACGCGAAATGCTTTTGCGAGCCAGGCCGTTGTCGCGCCAAACCAGAGAGTGGGTGGCGCAGGGTATGCCGCCAACGGCGGATGCTGGAGTGCCCATCAGGCTGCATGAGCGTGCCGCTACCGCCGTGCCGGATGCACGTGCAGAGGAAAGACATACGCCGGAGGAACCTGCCGATGCTGCGGCGCCACAGCACCTGGGGGCTAGAGCACACGCCAATGGAATTGTTCAACAATTGGTTGACGCGCACGCCGATCTTGCCGGCATGCTATCCATGATTCAGGATGGCAGGCGTGGCTAGGCGACACGTCTTCCTTCTGAAGCAGAGCAGCGTATTTTGCTCGAGCATTTCCCTAACTTGCTAAGGGGTGAACTCGGTAATGACTCGGAGCTCGCTACCGCGTTCCGTAGCGAGCTGCGTCGGGCGGTTCGCCAACAGGCGGCGTCAGCCCCCCCAAGAACACCAGCACGGTCCACCGCAAGGACGCCGGAGCGCGCGCACGCAGAGGCAATAAGCACGCTGGGCACACCTGCTTATACCCGCGCACCGCAGCACTTAGGGGCGACGGCACACGCCAATAGCATCGTTCAGCAATTGGTCAGCGCGGGCGCTAATCTTGCCCATACTCGCACCATGTTCCGCAATATGTTGAGAGGCGAAGAGGTGGCTCTTTCTGGAGCAGAACAGAGTGTTTTGCTCGAGCATTTTCCTGACATGCTAGCTAGTGGAATCGATCGCCACTCAGAGCTCGCTATCGAGCTCCGTGCGGCGTTTCGTAGAGCAGATAGCCAACAGGCGTCAGCGCCAGCAAGGACACCACCACGGCCCTCTGTCAGGACGCCGGAGCGGTCGCCAGCGCCGCGCACCGCTACAGAATCATCATCGGGCAGCAAC
Protein sequence:
MVGSINRAGPSGAPYGHTAPEPAPERAHESGSGASFSNSPQLPAHSSDAPTSQARDRREMLLRARPLSRQTREWVAQGMPPTADAGVPIRLHERAATAVPDARAEERHTPEEPADAAAPQHLGARAHANGIVQQLVDAHADLAGMLSMIQDGRRG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 74382.7 | 155 | 9.99 | -0.555 | 55.15 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: | Disease name: NONE |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR015133,IPR031759,IPR038342,IPR038448
Pfam: PF09046,PF16847
SMART:
KEGG:
PRINTS: