Effector profile
| PlantPEAD ID: PlantPEAD00953 | Uniprot ID: A0A1B2CW58 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 5261 | Pathogen type: Fungi |
| Species: Melampsora lini | Strain: strain CH5 | Other name: flax rust |
| Gene name: AvrL2 | NCBI Gene ID: KU743884 | |
| Entry name: A0A1B2CW58_MELLI | Protein name: AvrL2-C | |
| DOI: 10.1186/s12864-016-3011-9 | ||
Gene/Protein information
Gene sequence:
ATGGGCAAAGGAAATAACATTCAAACGCCGTCCTTTCGTGCATCTCGACTTCGAAGCTTTTGTTTAATCGCTTTCTTATTGTGTCAATCACTTCAATCTATCGTCTCACTACCAAAAATTTCCCCTGCTGAGGTGTCAGCATTGAAAACTCGCGTACGAGCACGGTTGGATCAGTTTTGCAGAGAACAAGGCTATAGACCTGAAAACAGTCAATTCTTTGCCATCCTTCGCGAGGAATATGCGCAGATCAAACCGCAATTTGGACACGCGCAGTACGCTCCAGCACACTCGCGCGACTCAGCTCCAAGTCACCAGGCAGAACAGAATTATGGCACAGGTGTTTTTCCCTCGCGAGTGACCCCAGGCATTGAAGATTGGGAAAAGAAAATGCACGACCAAGATTGGGAACATTATGAACGTGCCATTGTGGAGTTTATGAATGACAAAGGTATTTGGCTGCCTGATATTGATGAGGTCCACGGTATTCCGCCGCCTGAACCTTATATTTTTTCATCCCAAAAAAATTAG
Protein sequence:
MGKGNNIQTPSFRASRLRSFCLIAFLLCQSLQSIVSLPKISPAEVSALKTRVRARLDQFCREQGYRPENSQFFAILREEYAQIKPQFGHAQYAPAHSRDSAPSHQAEQNYGTGVFPSRVTPGIEDWEKKMHDQDWEHYERAIVEFMNDKGIWLPDIDEVHGIPPPEPYIFSSQKN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20093.7 | 175 | 6.59 | -0.627 | 59.98 |
Plant infestation information
| Experimental plant: Linum usitatissimum (related: flax) | |
| Susceptible plant: Linum usitatissimum | Disease name: Flax rust |
| Host classification: Eudicots | NCBI Species: 4006 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: