Effector profile
| PlantPEAD ID: PlantPEAD00966 | Uniprot ID: L8WQP7 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 456999 | Pathogen type: Fungi |
| Species: Rhizoctonia solani | Strain: AG-1 IA | Other name: Thanatephorus cucumeris, Rice sheath blight fungus |
| Gene name: RsIA_NP8 | NCBI Gene ID: AFRT01001430 | |
| Entry name: L8WQP7_THACA | Protein name: Uncharacterized protein | |
| DOI: 10.3389/fmicb.2020.01115 | ||
Gene/Protein information
Gene sequence:
ATGCGTTTTGCGACCGTAGCCTCTGCTGTGACCGTCTTGGTCAGTGCTGCTGCTCCCGCCGTGGCCACCTTCAATCTTCGCTGCAATCTCGGAAGCTGGTACTGGAAGGACAAGGACTGCTGCATTAAGGTTGGCGGACCCATATCTCCCTCTGGGAATGCTTGCCCCAACTTGTGGTTCTGGAACAAGGACACCAACTGCTGTGCCCCTCGGTACACTCCCCCTTACAACCAGCCATCGTGCAGCAACGGATGGGTCTGGAATCCCAGCACATACTCTTGTCGCCCGCCTGCTACACCCCCACCAAAGAACAATGATTGTGGCGACAACAAATGGTGGTGGGGTGGTCGCTCTTGCTGTCTTCCTCACGGAAACCCATCGCCGCCGCTCCCTCCTCGCGGAAACAACTGCCCACCCAGTTGGTACTGGCATGGACAACAAGGCTGCTGTGTACCTCAGCACCCTCCACCAACGCCTGTTCCGTCTTGCCCTCCCAACTGGGAGTGGAACCCTTACACCCAATGCTGCAAGCCTACTCCTCCTACTCCACCTGGCCCCCAACCGAGCAAGCGCGCTACTACTGATACCAAGCGCCACAATGCTGTCCCTCAGCACAAGAAGAAGGCGACTGCCCAGTACACCGAGCTCGAGGCTTTCTTCTGCCCCGCGGTCTGA
Protein sequence:
MRFATVASAVTVLVSAAAPAVATFNLRCNLGSWYWKDKDCCIKVGGPISPSGNACPNLWFWNKDTNCCAPRYTPPYNQPSCSNGWVWNPSTYSCRPPATPPPKNNDCGDNKWWWGGRSCCLPHGNPSPPLPPRGNNCPPSWYWHGQQGCCVPQHPPPTPVPSCPPNWEWNPYTQCCKPTPPTPPGPQPSKRATTDTKRHNAVPQHKKKATAQYTELEAFFCPAV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24715 | 224 | 8.95 | -0.716 | 60.23 |
Plant infestation information
| Experimental plant: Oryza sativa (related: rice) | |
| Susceptible plant: Oryza sativa | Disease name: Rice sheath blight |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: