Effector profile
| PlantPEAD ID: PlantPEAD00987 | Uniprot ID: A0A0M4CJE7 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 29920 | Pathogen type: Oomycota |
| Species: Phytophthora cactorum | Strain: 10300 | Other name: |
| Gene name: SCR96 | NCBI Gene ID: KT215393 | |
| Entry name: A0A0M4CJE7_9STRA | Protein name: Small cysteine-rich secretory protein SCR96 | |
| DOI: 10.1111/mpp.12303 | ||
Gene/Protein information
Gene sequence:
ATGAAGTTCTCGACCGTTTTCACCGCCGCTGCCGTCGCCGTCGTGTGCCTGCTGCAGCCCTCTGTCGCCGAGGAGCAGGCCTCCGTGCACCTCCGTGTCCACACCGTCGAGCAGAGCAACAACGGCGCTATCTGCTACCAGGCCTGCCAGTCGGGTCAGTACTGCCCTCGTGGTGAGAACAAGTGCCGTGCCCCGACTGGCAACCAGTGCTTCAACCCGGCCACGAGCCTCTTCCGTGAGGGCTGCGACCCCGGCTTCAAGTGTGACAAGGGCAAGTGCGTGTACAAGTAA
Protein sequence:
MKFSTVFTAAAVAVVCLLQPSVAEEQASVHLRVHTVEQSNNGAICYQACQSGQYCPRGENKCRAPTGNQCFNPATSLFREGCDPGFKCDKGKCVYK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 10395.8 | 96 | 8.4 | -0.244 | 38.26 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress), Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum, Nicotiana benthamiana | Disease name: Root rot |
| Host classification: Eudicots | NCBI Species: 4081, 4100 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: