Effector profile
| PlantPEAD ID: PlantPEAD00998 | Uniprot ID: A0A3M5JA58 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: Pmo M301020 | Other name: |
| Gene name: AvrPto1_Pmo M301020 | NCBI Gene ID: RBRD01000238 | |
| Entry name: A0A3M5JA58_PSEA0 | Protein name: Type III effector protein AvrPto1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGGGAAATATATGTGTCGGCGGATCCAGCATGGCCCATCAGGTAAACTCCCCAGATCGGGCCAGTAACAACTCGAATGACGATAATAATGTGTCATCAGGTCAGCTGCTCGACGTCAGGCACGCTTTGGCAGATGCTGCCGGGTTAACTAGAGAGCAGCATGCCTTTATCAGTAACGATGCACCTGCAAGCCTTAGGAGTCGATACAACGCTCTTTATACCCGAACGCAGAATACGTTTCATATGGCGGATATGCAGCATAGATATATGACAGGAGAGTCAAGAGTAAACCCGGGAATGCGGCCGCATGAAAATGTTAGTCAAATGCGAAGTGCTATAAGTGATTGGGATGACATGCGCGAAGCACTGCAGCATGCAATGGATATTCATGCTGACATGCCTGAGTCTCCAGAACGTTATGCCGCAACGATAAACCCAAGCGGATCTATTCGAATGTCGACCCTGAGCCCTTACAGGAACTGGTAA
Protein sequence:
MGNICVGGSSMAHQVNSPDRASNNSNDDNNVSSGQLLDVRHALADAAGLTREQHAFISNDAPASLRSRYNALYTRTQNTFHMADMQHRYMTGESRVNPGMRPHENVSQMRSAISDWDDMREALQHAMDIHADMPESPERYAATINPSGSIRMSTLSPYRNW
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17963.8 | 161 | 6.02 | -0.791 | 48.44 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036532,IPR020996
Pfam: PF11592
SMART:
KEGG:
PRINTS: