Effector profile
| PlantPEAD ID: PlantPEAD01000 | Uniprot ID: Q48B92 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola strain 1448A / Race 6 | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: AvrRps4 | NCBI Gene ID: CP000059 | |
| Entry name: Q48B92_PSE14 | Protein name: Type III effector AvrRps4 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGAATCGAATTTCAACCAGTTCAGTAAATTCCAGCTTCAGTTACTCGGCCCCTGCAGAGGAAGCGCAAAACCGCGTTTCCTCAGCCCCCACCAACTCCTCTCCACCTGGCACCACAACCGCTGTCGCCCAGGCGTCAGAGGGGCAAAAAAAGCCGGGGGCGGTATTAAGCATGCAGGCACAGCGACTGCGCCAATTGTGTGAGAGTTCATCTTACCAGTACCGGCAGAACGCGCTATTAGCTAAATCTTTTGATGCTCAACGCCTAGACATTAACACTCAAGCGGGCCCTTCCAATAGCCCTCACCTGAACGCTCTCAACAAGCTCCAACAACGAGACTTCAAACCTGCGGCTGGCGGGCTAGAAATCCCATTTACACCCAAATCCCTATTGGGCGGAGGTAAACGAGTCTATCAAATTGGCTCATCGTCACGCGACGTACAAGTCTGCCCACGTGGAGCTGGTGCTGCATTGAGGCAAGAAATCGCAGATAAGCAACTCATGGTTAACCATCTCACGGACGAGCTTCAAGACGCTATAGATGAGGCCAACCAAGCCGAGATAGCCAATACTTCACAACAGCTGCGCCAAGCCCGGTCTGACCTTGCTGAGCTACAGAGACGCTTTGCGGTACTCGGAAACGAAGACCGCAGAATCAACCAATAA
Protein sequence:
MNRISTSSVNSSFSYSAPAEEAQNRVSSAPTNSSPPGTTTAVAQASEGQKKPGAVLSMQAQRLRQLCESSSYQYRQNALLAKSFDAQRLDINTQAGPSNSPHLNALNKLQQRDFKPAAGGLEIPFTPKSLLGGGKRVYQIGSSSRDVQVCPRGAGAALRQEIADKQLMVNHLTDELQDAIDEANQAEIANTSQQLRQARSDLAELQRRFAVLGNEDRRINQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23953.6 | 221 | 9.23 | -0.671 | 52.4 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q8H0Y8
|
Probable WRKY transcription factor 41
|
WRKY41
|
Arabidopsis thaliana (related: thale cress)
|
MEMMNWERRSLLNELIHGLKAAKQLQGSSSPSLSASSSYLTTEIKENLLHNIVSSFKKAILMLNGSTTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGDPTIFEVTYRGTHTCSQGIPLPEKRETKPKHTVAVNYQNLRASLTVRTGGLGSEAFSFPVTSPLYTYESINGGGTFYHHVGSSGPSDFTGLISTNTSTGSSPIFDVNFQFDPTAEINTGFPTFFHNSI
|
|
Q8LPQ5
|
Zinc finger protein BRUTUS
|
BTS
|
Arabidopsis thaliana (related: thale cress)
|
MATPLPDFETARGGGAVASSSTTVLPSSVSSSSSSSRPLPVANSFSDDAEEISPILIFLFFHKAVCSELEALHRLALEFATGHHVDLRLLRERYRFLRSIYKHHCNAEDEVIFSALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSATETDESYRRELARSTGALQTSVSQHLAKEQKQVFPLLIEKFKYEEQAYIVWRFLCSIPVNMLAVFLPWISSSISVDESKEMQTCLKKIVPGEKLLQQVIFTWLGGKSNTVASCRIEDSMFQCCLDSSSSMLPCKASREQCACEGSKIGKRKYPELTNFGSSDTLHPVDEIKLWHKSINKEMKEIADEARKIQLSGDFSDLSAFDERLQYIAEVCIFHSLAEDKIIFPAVDGEFSFSEEHDEEENQFNEFRCLIENIKSAGASSTSAAEFYTKLCSHADQIMETIQRHFHNEEIQVLPLARKNFSFKRQQELLYQSLCIMPLRLIERVLPWLTASLTEDEAKNFLKNLQAGAPKSDVALVTLFSGWACKGRKAGECLSPNGNGLCPVKTLSNIKEVNLQSCNACASVPCTSRSTKSCCQHQDKRPAKRTAVLSCEKKTTPHSTEVANGCKPSGNGRSCCVPDLGVNNNCLELGSLPAAKAMRSSSLNSAAPALNSSLFIWEMDSNSFGTGHAERPVATIFKFHKAISKDLEFLDVESGKLIDCDGTFIRQFIGRFHLLWGFYKAHSNAEDDILFPALESKETLHNVSHSYTLDHKQEEKLFGDIYSVLTELSILHEKLQSDSMMEDIAQTDTVRTDIDNGDCNKKYNELATKLQGMCKSIKITLDQHIFLEELELWPLFDKHFSIQEQDKIVGRIIGTTGAEVLQSMLPWVTSALSEDEQNRMMDTWKQATKNTMFDEWLNECWKGSPDSSSTETSKPSPQKDNDHQEILDQSGELFKPGWKDIFRMNQNELEAEIRKVYQDSTLDPRRKDYLVQNWRTSRWIAAQQKLPKEAETAVNGDVELGCSPSFRDPEKQIYGCEHYKRNCKLRAACCDQLFTCRFCHDKVSDHSMDRKLVTEMLCMRCLKVQPVGPICTTPSCDGFPMAKHYCSICKLFDDERAVYHCPFCNLCRVGEGLGIDFFHCMTCNCCLGMKLVNHKCLEKSLETNCPICCEFLFTSSEAVRALPCGHYMHSACFQAYTCSHYTCPICGKSLGDMAVYFGMLDALLAAEELPEEYKNRCQDILCNDCERKGTTRFHWLYHKCGSCGSYNTRVIKSETIPPDCSTSS
|
External Links
Interpro: IPR048928,IPR048927
Pfam: PF21611
SMART:
KEGG: psp:PSPPH_A0087
PRINTS: