Effector profile
| PlantPEAD ID: PlantPEAD01001 | Uniprot ID: Q48DU8 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola strain 1448A / Race 6 | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: HOPAE1 | NCBI Gene ID: CP000058 | |
| Entry name: HOAE1_PSE14 | Protein name: Effector protein hopAE1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGATGCCCTCTCAGATCACGCGCTCCTCTCATTCCTCATTGCCGGAGGTTGCTCCTGCGTCCGGCGATGCAACCGGCGTTAGTGAGCAAACTCCGCAGCAGGCTCGTACCGTAGCGTTTTTTTCCTCCGGCGAGCTGGCCGTGGCATTTGGTCGCACCTCGGCTGCGCCAGAGCAGGACTCTGTGCGTCTGTTGTCTGCTCTTCAGCGTGAGCTGGATAAACAGCATCCGTCCTGGCACACCGTTGCTCAACTCTGTCAGAGCCTCGCCGAGGTCGGCACGACCGAGCAGGGCTGGCATCAACTGGCAAGCGAGGATCAGCTGCCGGCGCTGAGAGAACTGCTTGACCGTTGTACTCACCGGCTGGCCGATATGCCGGCTGCTCACGCATCTCACGACTCGCTGTCGCAGGCCTGTGAAGGGCTCAGGACGGCGCGGCTGCACCAATCCGTCGCTCGTTTGACTGCCCGACCGTCCTCCCTGGCCCGGGCGATGGCGGATCTGCTGACGTTGACTCATCTGGATCCCGAGACGCTGGGCGCAGAGCCCCCCGTTATTTCGTCTTACACGCTCTTCAGTCATTTCGTTCGCACGGCCAAGCAGCGTACGGCGGATTTGAATGACAGCCTCCAGCGTCAACCCGACGCGGTCGTCAGTCTGCTGCGCTCACATGCCGACACGCTCAATGATCTGGAGATGTTGCCGGGCGCATTGCAGGCATTGACCGAAAATTGCCAGGACGCGCCAGCCCGCAATGAATTGCGCGAGCTGGCGGAAGTAGCGGGGGCGCTGCTGCAGCTATTGCTCGAACACGATCTTTTGCCGAGGCTGGAGGAAATCTCCATCGAGCCAGGTGAAGCACCTGCACCTGGCCACGAGCCTGCCGAGCCCAGGCTGACCACACGCCAGGCATTGCTCAAGGTCGGCGGCAATCTGGTGCGCAAGTTTGATGCCTACGGGGCGCTCGCGCCGATGGATGACAAGGCGTTGCTGGCTTTGATGCGCACCCCGGCGCCACACCTGTCGCCCGATCAGATGCATGCCTTCCTGAACAAGCATGTGCTGCATCTCACGCAAGAACAACGCGATATCGTCAGCAATACCCCGCTGCCCTTCGCCCCTGAAGAAGACATCGAGGCCAGGTACGGCATGGGTTTCGATGAAAAACTGCGGTTGGCGCTGGCCAACGGTTCGCTGGTGTTGAGCGAGGAGCAACTGGCCCGTCTTGGTGATTTGCCAAGTGCCGCTACCACGACGTCCGACGTTGTGCAGACGCTGCTGGAAAAGCCATCGTCTGCGCTGAGCGAAGCCGAGCGTGACATGTTGGGCGCAATCGTTCAGGCCAATGCTCAGGGGCAACTCGACGCCTGGCGCGCTCACAACGAACAGTTGCCAGCAGTGTTGAGCCGCTCGGGGCTGCCCTCTGATGTAAAAGACGAGTTGCTCAGCCTCAACAAAAGCATGAATGCCGAACTGGGCACGCTCAAGAACGGCGCCTCGCTCAAGAGTCGCGTCCTTGCAAGCCCGGCGATGCTGCTCGCGCTGGCACCCTTGCCACTGGCCGTGGCGTTCGTCAGCAAGGACAACTCCTACAGCTCATCGCTGGTTGCCCACTTCACCAAGAACGCGGTGTTCATGGCTGGCCTGATGATGAACGAGCTGACCAACGCGCGGACCAATGTCGATCATGGCCTGAACCGCTACTTCGTCACCGTGCTGGCCAACGCCATCGTGGCGCAGCCCACCTTTGCCAGGAACGAACACCTGCTGGAGCAGGTCGGCTTCGGTATCGCAACGGCCGTGGCATCGGGCGCTGCCACGCTGGGCGTATTCAACCGTGAATCGATCGTCGCTGCCTTCAAGCTCGCCAAGAGCAAGCTTTCCAGGCAAGACACCGGGAACGCCCGCATCCCGCAGGAAGACCATCTGGCCGTGGTCAAGCATTTCGACGTCAGCGAGCATTTTGCCCAGCAGATGAAAGTGGCGACCGAATTGTACAAGCAAGACAAAAGCATCACCGACATCATGAACTCGAGCCTGACATACCTGGGCACCAAAAGCAGCGAGTTCCAGGCCAGGTTCGAAGTCGCCGATGCCCTGCGCGCAGGGCTGCAACTGGCCGAGGGGGAGCGCAAGGCGGACCCTGACTTCTACACCAAGCTGGGCCTGGTGGCCTTGACGGCGAGTATCGGTGCGGCGCTGGTGATGTTGATGAAAAGCATGGTCGGCAAAGCCGATTACGCGGCGGATGGCGTCTGGTGCGTATCGGAGATGCTCAAACTGGCCATGAACCCTGAAGTCGATATGCAAAAGGCGGTTCAGGTCTTCAAGGAAATCGTCGGTCTGAATCTGGTGATGACGGGGTTTCTGGGCGTCAACAAAGTCTGGAATTTTCTCGACAAGGGGATCAAAGGCTACGCCTCCGGTGCTGCGGTCCTGACCGCAGCCAACCTCACACTTCCCGGTATGGTTGGAGAAGTGGCTGGCGCAGCAGCCGGCAAGGGGTTGAGCTACCTGACTGACAAAGGCAAGGCGGCGCATCAGGCCGGCAGGGCGGCAGCGTCCTGGGCCGGAGATTACGTCAGCACGTCGCGTTTGGGGAGCGCGGTCGGCACCCTGCAAACGGCAATTCCGGGCAGGATTGCAGGCGGGCAGGTAGTGGCGGGGCTCTACGACCGCTTCCGGTACCTGACCTGGTCGCACCCGGCGCCTGCACCGCAAGCGGCTGGCGAGCCATAA
Protein sequence:
MMPSQITRSSHSSLPEVAPASGDATGVSEQTPQQARTVAFFSSGELAVAFGRTSAAPEQDSVRLLSALQRELDKQHPSWHTVAQLCQSLAEVGTTEQGWHQLASEDQLPALRELLDRCTHRLADMPAAHASHDSLSQACEGLRTARLHQSVARLTARPSSLARAMADLLTLTHLDPETLGAEPPVISSYTLFSHFVRTAKQRTADLNDSLQRQPDAVVSLLRSHADTLNDLEMLPGALQALTENCQDAPARNELRELAEVAGALLQLLLEHDLLPRLEEISIEPGEAPAPGHEPAEPRLTTRQALLKVGGNLVRKFDAYGALAPMDDKALLALMRTPAPHLSPDQMHAFLNKHVLHLTQEQRDIVSNTPLPFAPEEDIEARYGMGFDEKLRLALANGSLVLSEEQLARLGDLPSAATTTSDVVQTLLEKPSSALSEAERDMLGAIVQANAQGQLDAWRAHNEQLPAVLSRSGLPSDVKDELLSLNKSMNAELGTLKNGASLKSRVLASPAMLLALAPLPLAVAFVSKDNSYSSSLVAHFTKNAVFMAGLMMNELTNARTNVDHGLNRYFVTVLANAIVAQPTFARNEHLLEQVGFGIATAVASGAATLGVFNRESIVAAFKLAKSKLSRQDTGNARIPQEDHLAVVKHFDVSEHFAQQMKVATELYKQDKSITDIMNSSLTYLGTKSSEFQARFEVADALRAGLQLAEGERKADPDFYTKLGLVALTASIGAALVMLMKSMVGKADYAADGVWCVSEMLKLAMNPEVDMQKAVQVFKEIVGLNLVMTGFLGVNKVWNFLDKGIKGYASGAAVLTAANLTLPGMVGEVAGAAAGKGLSYLTDKGKAAHQAGRAAASWAGDYVSTSRLGSAVGTLQTAIPGRIAGGQVVAGLYDRFRYLTWSHPAPAPQAAGEP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 97695.2 | 912 | 5.83 | -0.088 | 36.68 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR029378
Pfam: PF15457
SMART:
KEGG: psp:PSPPH_4326
PRINTS: