Effector profile
| PlantPEAD ID: PlantPEAD01002 | Uniprot ID: A0A3M6BBN2 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola strain ICMP 637 | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: HopAF1_Pph 1448A | NCBI Gene ID: RBRG01000070 | |
| Entry name: A0A3M6BBN2_PSESH | Protein name: Type III effector HopAF1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGGGACTATGTATTTCAAAACACTCTGGCAGCAGCTACAGCTACAGTGATAGAGACCACTGGGAAGTGCCCGTAAACCCTTCAAACGTCAGAGCTGTATCCAGTCATCAAACGGCATCTGCGAGCGATAGAGCCTCAGACAAGGTGGACGAACGTCCTGCAACATTTTCTCATTTTCAACTCGCGCGGTGCGGCGAAGATTATACTCTTAGTATGGTTTCTTTAGCAGCTTATCAAGCAGAAAGACGGCATCGCGGTAATTTAATAAAAGATCGTAGTCAATCCGCACTTCCCTGGGTGCAGGTATATCACTCTGAAACAGGCCTGAATTACAGTTTCCAGATTGACAGAACCACGACTGTCAAAGTGGCCGGATTCAACTACAATGTCCCCAATGATGGAAAGACTCGGCATTTATACAGCGCCGGCACGAGCCAGGTAAATATGCCTGTCATCGCAGACAACATGAGTGCGTGCATTGCTGTCGCGTGTGCGGCGGAAAACGTAGATGCCGGCACGGGTGAACGTAGGCCGGGGGCGAAAGTTCGCGTATTCCATCTGATCCCTTTTCGTCACGAAGACCTTATGCCAAAACAAGTTTTAGCGTCTGTGCGCGATTATCTGCGGGATATTAAGGAACAGGGGCTAACAATGCGCGCAGCCCTGCATGGAGGAAATAGAGAGGGTGATTTCTCAGTCAGCACTGCGGAGGCATTGAAAAGCCTGTTTGCTGATGAAGGAATCCCGCTTGAATTCGACGAAACTTGCGCAAACCGAACATCTGAAACACTGCTTGGCGCCGTTATTCTTAATGACAACTCGACTCAATTCATAAAGCATTTGGTCGCTTTATGA
Protein sequence:
MGLCISKHSGSSYSYSDRDHWEVPVNPSNVRAVSSHQTASASDRASDKVDERPATFSHFQLARCGEDYTLSMVSLAAYQAERRHRGNLIKDRSQSALPWVQVYHSETGLNYSFQIDRTTTVKVAGFNYNVPNDGKTRHLYSAGTSQVNMPVIADNMSACIAVACAAENVDAGTGERRPGAKVRVFHLIPFRHEDLMPKQVLASVRDYLRDIKEQGLTMRAALHGGNREGDFSVSTAEALKSLFADEGIPLEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 31295 | 284 | 6.41 | -0.382 | 30.69 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: