Effector profile
| PlantPEAD ID: PlantPEAD01003 | Uniprot ID: A0A7Z6UUX1 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola strain N7512 | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: HopAF1_Ppi 1704B | NCBI Gene ID: RBUI01000054 | |
| Entry name: A0A7Z6UUX1_PSESH | Protein name: Type III effector HopAF1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGGGACTATGTATTTCAAAACATTCTGGCAGCAGCTACAGCTACAGTGATAGCGACCGCTGGGAAGTGCCTGTAAACCCTTCAAATGCCAGGCCTGCTTCTAGTCATCAAACGGCATCTGCGAGCGATAGAGCCTCAGACGAGGTGGACGAACGTCCTGCAACATTTTCTCATTTTCAACTCGCGCGGTGCGGCGAAGATTATACTCTTAGTATGGTTTCTTTAGCAGCTTATCAAGCAGAAAGACGGCATCGCGGTAATTTAATAAAGGATCGTAGTCAATCCGCACTTCCCTGGGTGCAGGTATATCACTCTGAAACAGGCCTGGATTACAGTTTCCAGATTGACAGAACCACGACTGTCAAAGTGGCCGGATTCAACTACAATGTCCCCAATGATGGAGAGACTCGGCATTTATACAGTGCCGGCACGAGCCAGGTAAATATGCCTGTCATCACAGACAACATGAGTGCGTGCATTGCTGTCGCGTGTGCGGCGGAAAACGTAGATGCCGGTACGGGTGAACGTAGGCCGGGGGCGAAAGTTCGCGTATTCCATCTGTTCCCTTTTCGTCGCGAAGACCTTATGCCAAAACAAGTTTTAGCGTCTGTGCGCGATTATCTGCGGGATATTAAGGAACAGGGGCTAACAATGCGCGCAGCCCTGCATGGAGGAAATAGAGAGGGTGATTTCTCAGTCAGCACTGCGGAGGCATTGAAAAGCCTGTTTGCTGATGAAGGAATCCCGCTTGAATTCGACGAAACTTGTGCAAACCGAACATCTGAAACACTGCTTGGCGCCGTTATTCTTAATGACAACTCGACTCAATTCATAAAGCATTTGGTCGCTTTATGA
Protein sequence:
MGLCISKHSGSSYSYSDSDRWEVPVNPSNARPASSHQTASASDRASDEVDERPATFSHFQLARCGEDYTLSMVSLAAYQAERRHRGNLIKDRSQSALPWVQVYHSETGLDYSFQIDRTTTVKVAGFNYNVPNDGETRHLYSAGTSQVNMPVITDNMSACIAVACAAENVDAGTGERRPGAKVRVFHLFPFRREDLMPKQVLASVRDYLRDIKEQGLTMRAALHGGNREGDFSVSTAEALKSLFADEGIPLEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 31300.8 | 284 | 5.72 | -0.419 | 37.89 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: