Effector profile
PlantPEAD ID: PlantPEAD01009 Uniprot ID: Q5DI78 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. phaseolicola strain ICMP 637 Other name: Pseudomonas savastanoi pv. phaseolicola
Gene name: HopAW1_Pph 1448A NCBI Gene ID: AY803997
Entry name: Q5DI78_PSESH Protein name: Type III effector HopAW1
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
CGAGCACGGCTGTTTTCGATTGCAAGCCGCTACACCTAACGCCAACCTAGAACTGACCCTCTGGGTAAAACTGGCGCTTTGAGCTGCCATGCCTTTTCAGCGGAACTGATAGAAGGTCTCGACCACTCAGTGTTTCTACTTTTCAGAGGATATGCGCGTGAGAGTATCAAACACTTTGCAACCAGCGGTCGAACATACTACTCAAGCAACTATAGGGGGATGCTCCAGCTCCACAGCTTCACGCATCAAAGAGATACCTTTCAAGCAAGCAGATGAGCTGGCAAGAGTCGGCGATCAACGAGCGGCCTGCGTTGTGTTAACCGCAGCGTGGTTGGACCGCGTCCACCATCACTCACAACCGGCCGAAGCACGTATCGATCATATGCGACATAGAGCGACCCTGGAACAAGTTGCTGAGCGTCAGCAGACGTACCGTAATCATGAAATAAATAATCCTCGTACTCCGTACGAAATATTATTCTCTCCCACCTTCCGAGATTATTCATTGCGTCTCAGTAATGCTCGCATTCTTGATATTATGAGCGATGAAGAACAAGCTATGGGAAGCATGGCAAATACGCTGCGAGATCCCAATTCGTCCCATGTTCTTGTTATCGTGAGGATGAACGGAGATAACCATGCGATTGCCACGCACTGTACTGGTAACAAATTACATGTATTTGATCCGAATCATGGAGAATACAGTTTTAAAGCTGACACAGGTACCGTTGAGGAGAGCATGCGAGATATAATTCAAGCCTATTCGAGTAGATTTCCGGTCCCAGAAATACATATTCTGCCTGTGCGCTCGTAA
Protein sequence:
VRVSNTLQPAVEHTTQATIGGCSSSTASRIKEIPFKQADELARVGDQRAACVVLTAAWLDRVHHHSQPAEARIDHMRHRATLEQVAERQQTYRNHEINNPRTPYEILFSPTFRDYSLRLSNARILDIMSDEEQAMGSMANTLRDPNSSHVLVIVRMNGDNHAIATHCTGNKLHVFDPNHGEYSFKADTGTVEESMRDIIQAYSSRFPVPEIHILPVRS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
24847.9 218 6.67 -0.526 47.77
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Phaseolus vulgaris Disease name: Halo blight of bean
Host classification: Eudicots NCBI Species: 3885
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.