Effector profile
PlantPEAD ID: PlantPEAD01013 Uniprot ID: E5G0U4 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. aptata strain DSM 50252 Other name:
Gene name: HOPBA1 NCBI Gene ID: HM641787
Entry name: E5G0U4_PSEAP Protein name: HopBA1
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGCTAAATAGAATTTCATCATCCAGCCCGACCAGCTATGTCAGTTCAGGCAGCTCATCGGCAGGTATCAACCCCAGTATAAATGTCAGGCCTCCAAGGGGTGGGCCCGTTGATACGCTAGTAGGCGCAGCCAGTGACAACAACCTTGTGTACATTGGTGATGAGCACGGTAAGCTTTTCATACCTAAACTAATAACCGAGTCCGCTGCAAAACTTAAAAATGCAGGCGTCGACCACCTGGCGGTAGAGTTTGTAAAGCACTCCGATGGCGCCGCGTTCAGAGAAGCATTGAGCGATGGAAAAAGCGCTGTCAAACACTTTCTGGAAGCATCATGGGGGCGACACGGAGACGCTTGGCTAGACAAGGTTTCTGAGGCGCTGTGCAGTGCTCATCGTGCAGGGATTTATGTTTCTGGAATTGATAGGAAAATGGCGATAGATCAGCCTAAAACGCCGATGCAAAAAATTTTGTACATGAAAAAGAGGCTAGCTTTGAATGTAGCTTGGGATGCGGCGGCTACAAGAGAGGCCTCCGCTGTCTGCGCGAACAAAAGTATCGTATGGGGCGGTGCCGGCCATTTCAGCAACAGCAAGACTGACGGACCAAAAGACATGCGGCCAGGCTTGGTAATCTCGTTTGATCTGACTGGAAGAGGCTCTAGCAGAATCAATGATGCTGATGAACATAGCCATATCGTGATCGCTGGCGAGGATAACTAA
Protein sequence:
MLNRISSSSPTSYVSSGSSSAGINPSINVRPPRGGPVDTLVGAASDNNLVYIGDEHGKLFIPKLITESAAKLKNAGVDHLAVEFVKHSDGAAFREALSDGKSAVKHFLEASWGRHGDAWLDKVSEALCSAHRAGIYVSGIDRKMAIDQPKTPMQKILYMKKRLALNVAWDAAATREASAVCANKSIVWGGAGHFSNSKTDGPKDMRPGLVISFDLTGRGSSRINDADEHSHIVIAGEDN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
25406.6 239 8.48 -0.274 21.91
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Arabidopsis thaliana Disease name: NONE
Host classification: Eudicots NCBI Species: 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
F4HT77
Disease resistance protein RBA1
RBA1
Arabidopsis thaliana (related: thale cress)
MTSVSPRYRNVPVPKVFLSFRGEEIRHGFISHLADALERYGIMFIIDKDEQRGNDLTSLLLRIKESKVALVIFSSRFAESRFCMDEIVKMKECVDERKLLVIPIFYKVRARDVSGRTGDFGKKFWALAQKSRGCQIKEWMEALECISNKMGLSLGDGRSEADFIKEIVKEVERVLATFTSEDTEDHHCQTVKLLKGLVVGCLAHQELPLVLVFTQVYYYVKFSIFFIEEIFSSCFRKGFVLKPCKEDLQINSISIPGIDLENFKNMMQQAMYELNQMLLQSLGNIDPHRDVAFENQPQDQPDSPIALPEERRVALEATKFCGHAAYWWNQTKTTRARIGKVLIHFWEKLKKKFKDTYDRTVRI