Effector profile
PlantPEAD ID: PlantPEAD01014 | Uniprot ID: A0A3M3X2E3 | Source: Article |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
Species: Pseudomonas syringae | Strain: pv. aptata strain ICMP 4388 | Other name: |
Gene name: HOPBG1 | NCBI Gene ID: RBPX01000212 | |
Entry name: A0A3M3X2E3_PSEAP | Protein name: HopBF1 | |
DOI: 10.1126/science.1203659 |
Gene/Protein information
Gene sequence:
ATGCCAAGTATTTCCAATGCTGCCTCCATCCAGCGACATCCCGGTATCCAGGATGTCACCGCGCCTGCTGAATTTACCTCAATCCCTTCCGTGGGCGAAAAGCTTGGAAGCGGAAGTCAGAAGGACGTTTATCATTCTCGGCAGGATCCACGGCAATGCATATGCCTGATCCGGCCAGACACAACCGGGATTATTTCCGGAAATGAATACGCAGCAAAAGAGCTAAAGATGACCAAACACCTAAAAAACCTCGGGTTTCCGGTCGTTGATGCACACGCCTTAGTCAAATACGATACCAAGGTCGGGATAGCCAAAGACTACATCCATCATGCGCTGGACTCCGAAGACGTTATCCATAACCGTAAACACATTCCAACTGACATGGCTTTCAATAAAAACGTTATGAAGGACTGTGATGAGATCATATCCAGACTCAGAACCCATAGCCTGCACATTGAAGACTTACAGTTCCTGATCGATGGGTATGGTCGGGTGCGAATCAATGACCCAAGAGATGTGATCCGGTCGTCGCCAGAAAAAAGCATCGCTAAAGTTCGAGAATTGCGCGCCATTGCGTTGAACAACCTGCTGGACGACAGTGATTAA
Protein sequence:
MPSISNAASIQRHPGIQDVTAPAEFTSIPSVGEKLGSGSQKDVYHSRQDPRQCICLIRPDTTGIISGNEYAAKELKMTKHLKNLGFPVVDAHALVKYDTKVGIAKDYIHHALDSEDVIHNRKHIPTDMAFNKNVMKDCDEIISRLRTHSLHIEDLQFLIDGYGRVRINDPRDVIRSSPEKSIAKVRELRAIALNNLLDDSD
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
22486.6 | 201 | 6.79 | -0.456 | 46.91 |
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress) | |
Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
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No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: