Effector profile
| PlantPEAD ID: PlantPEAD01014 | Uniprot ID: A0A3M3X2E3 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. aptata strain ICMP 4388 | Other name: |
| Gene name: HOPBG1 | NCBI Gene ID: RBPX01000212 | |
| Entry name: A0A3M3X2E3_PSEAP | Protein name: HopBF1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGCCAAGTATTTCCAATGCTGCCTCCATCCAGCGACATCCCGGTATCCAGGATGTCACCGCGCCTGCTGAATTTACCTCAATCCCTTCCGTGGGCGAAAAGCTTGGAAGCGGAAGTCAGAAGGACGTTTATCATTCTCGGCAGGATCCACGGCAATGCATATGCCTGATCCGGCCAGACACAACCGGGATTATTTCCGGAAATGAATACGCAGCAAAAGAGCTAAAGATGACCAAACACCTAAAAAACCTCGGGTTTCCGGTCGTTGATGCACACGCCTTAGTCAAATACGATACCAAGGTCGGGATAGCCAAAGACTACATCCATCATGCGCTGGACTCCGAAGACGTTATCCATAACCGTAAACACATTCCAACTGACATGGCTTTCAATAAAAACGTTATGAAGGACTGTGATGAGATCATATCCAGACTCAGAACCCATAGCCTGCACATTGAAGACTTACAGTTCCTGATCGATGGGTATGGTCGGGTGCGAATCAATGACCCAAGAGATGTGATCCGGTCGTCGCCAGAAAAAAGCATCGCTAAAGTTCGAGAATTGCGCGCCATTGCGTTGAACAACCTGCTGGACGACAGTGATTAA
Protein sequence:
MPSISNAASIQRHPGIQDVTAPAEFTSIPSVGEKLGSGSQKDVYHSRQDPRQCICLIRPDTTGIISGNEYAAKELKMTKHLKNLGFPVVDAHALVKYDTKVGIAKDYIHHALDSEDVIHNRKHIPTDMAFNKNVMKDCDEIISRLRTHSLHIEDLQFLIDGYGRVRINDPRDVIRSSPEKSIAKVRELRAIALNNLLDDSD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22486.6 | 201 | 6.79 | -0.456 | 46.91 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: