Effector profile
| PlantPEAD ID: PlantPEAD01016 | Uniprot ID: Q9F3T6 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola strain 1449B / Race 7 | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: HOPD1 | NCBI Gene ID: AJ277494 | |
| Entry name: AVRD1_PSESH | Protein name: Effector protein AvrPphD | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGAATCCTCTACGATCTATTCAACACAACATTACAACTCCCCCAATCAGTGGCGGTCAGCCATTAGACGCGGTGGGCCCTCAGGCCCAGCAATCCCATCCTAAAAGGATTTCACCTTCTCAATTGAGCCAAAGCGCTCACCAGGCTCTAGAACGCCTTTCAGCTAATGCCGAACACCAACGCCTTGCATCACTGGTACGCAACGCTCTGCAGGATGGCACATTTCAATTTCAATCCAGTAACCACACGCAAGTAACCTATAAAGCGTCAATCTGTCTGCCAGCTGACACCGATACCGTGAGAACCGACCACTTGATTAATAACGAGCTGACGGTTCAGGCCCGATTAAATGATCAATCGGAGTACGACATCGTCAGCGCACATTTGCATGGCTCTTCGAAAGCCATATCCTTCGACGTACCCAGCCCCCCACCCGCACATGGTTCAGCATCTTCTGTCTTGAGTGAACGGACCCATCTAGGTATGAGTAGCGTTCTCTCACAAGATGCAGTGGATAGCAGTAGCCTGGAAACTCCGTTAGTGAGCTCGCCAGACCATTCTCGTCCGCCATCACAGCCAAAGCCCGTGCATATCGGGTCGGTCCGCAGGGACTCTGGTAGCCTTGTTTCCGATAACCCGGTAGTGCAGGCCCTGCTATCGTTTGTGCAGGCCGACCAGGCATTTCCACCACAGGCCGCGAGCATTGCCGGGGTCCAGCTGGAAATGCGGTCACGTCGGGATATTGAGCAAGCACTTGAGGAATTAAAAGGCGCCTTCACGGTGGAGAAGGCGCAACTGATGTCCGGGGGCAGCTCGTCGGAGCGGGTAGATGAGGACGTCAACGCAGACATCCATATACCCTTATTGCTCAAGGCTATCGAGCGGGGGGCTGGGGCATTTGGCCCAGGCGCGTTGATTGAGATCGCGGATGGCGGCCAGATAAGCGCGAAAGCATTTCTCGCCTCATGTGCTCCCACGATCACGTCCAATGACGATGTCCTCTCCGAGTTCATCAACCAGAAACTCAAGGGGGACGACGATCTTCAGGTTCGCCTGGGCGCACAGGAATTGTTGCATGTAGCCACCAAGAAGGAATTCCAGCTCGGCGGTCTAGCCGGCAGCATCGGGGTCAGCAGCATACTCGGCTCGGCATGGGAGCTTGGCGCTTCTGAGCTTTTGAAAAATGCCATCTTCGGCAAAAATTTCTCACCGAGCCAATATGCCCTGCAATTGGCTGGAATCGATTCAGTGCCTCCTTTTATTATCGAGGCCATGGACTCCTTTTGCGTACTTGTCATCATCAAAGGCATGAAAGGTGAGTTGTGGTCCATGAAAGATCTACTCCCCAAGGCGTTGAAGGCAGGCGCCATCTCCTCGGCGATGTCATTCCCCAATAATGTTTTGCAGTACGCAGGCTTCAAATCCAGAGTCGCCGATCTTGCGGCAAACTCGATAACAACTGAAGCGGCCATCTTTGGCGCCGCCTCCGGTATCCCACCCGAGGTCAAGGAAAGTGAAGAGCTGATGCGTGCTGGCTTATTCCAGAGCATGAAGGACGGCGTGATGGCTCATCCAGGCGAGGGGATGGATACCAAAGAGACGATTGAGCGGATGACGCGCCATGCGCTGGATATTGCTCCGGGTGAGAGCACCGCTGTCAAGTCCATGGGACTGGCAGCGATTGTCGGGATGATTCCACTGATTGCCAGCAGCAAGGCAACCGGGCTAGTGTCGGAACAGATACTGCGTATTTTCCGGAACGCCGTCTTCAATCCAATCGAAGCCATCGCTCTGAACGCGTTGGCGCTTGGCGGGCGTGTCAACGTTCCCGGGCTATTTGATTCCGACAATGCCAAGCATGCACGCGTGGCACAAACCATCCTTGCGCGGGCCAGCCAGCACATGGAAGCTGGAGACCGTGAAATTTCCGCAGAGGAGCTACATCAAATGCTGGCTCCCCGGAGCGAGTTCCTGCGCCATGTGGGATCTGCGATTGTCAACGGCATGAATGCCAGCTTTGAGGCAATTCCCGCCCTGGTTCGGAAGCTTGGATACGGTGAGGCTCCATTGGCCGAACGTATTCCGTATCAAGACCTGGCTGTGCCCGACACGTCGCGGCAGCCCGCACCCTGA
Protein sequence:
MNPLRSIQHNITTPPISGGQPLDAVGPQAQQSHPKRISPSQLSQSAHQALERLSANAEHQRLASLVRNALQDGTFQFQSSNHTQVTYKASICLPADTDTVRTDHLINNELTVQARLNDQSEYDIVSAHLHGSSKAISFDVPSPPPAHGSASSVLSERTHLGMSSVLSQDAVDSSSLETPLVSSPDHSRPPSQPKPVHIGSVRRDSGSLVSDNPVVQALLSFVQADQAFPPQAASIAGVQLEMRSRRDIEQALEELKGAFTVEKAQLMSGGSSSERVDEDVNADIHIPLLLKAIERGAGAFGPGALIEIADGGQISAKAFLASCAPTITSNDDVLSEFINQKLKGDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAIFGKNFSPSQYALQLAGIDSVPPFIIEAMDSFCVLVIIKGMKGELWSMKDLLPKALKAGAISSAMSFPNNVLQYAGFKSRVADLAANSITTEAAIFGAASGIPPEVKESEELMRAGLFQSMKDGVMAHPGEGMDTKETIERMTRHALDIAPGESTAVKSMGLAAIVGMIPLIASSKATGLVSEQILRIFRNAVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVAQTILARASQHMEAGDREISAEELHQMLAPRSEFLRHVGSAIVNGMNASFEAIPALVRKLGYGEAPLAERIPYQDLAVPDTSRQPAP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 75405.5 | 710 | 5.59 | -0.099 | 50.14 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: