Effector profile
PlantPEAD ID: PlantPEAD01017 Uniprot ID: Q48NG8 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. phaseolicola strain 1448A / Race 6 Other name: Pseudomonas savastanoi pv. phaseolicola
Gene name: HOPG1 NCBI Gene ID: CP000058
Entry name: Q48NG8_PSE14 Protein name: Type III effector HopG1
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGCAAATAAGGAACAGTCATCTCTACTCAGCCTCAAGACTGGTGCAGAATACCTTTAATGCCTCGTCTACGAAAGAAGCGGCTAATACAATAGCAAAAAATAATGAGTCCGCTGCGCTGAGCGCAACTCAAACCGCACGGACACACGAGGGCGATTCGAAAGGCAAATCTAGTAATGGCTCTCGATCACACCTCCGAAGTATGAGGTACGCTGCTTATCTTGCGGGCAGCGCCTACCTCTACGACAAAACAGTCAATGATTTTTTTCTTTCTACCACTTCCTTAAATGACGGCAAACAAGGCTTTACCAGCGACGCCCGCCTGCAGAAGGCAGAGAAAAAGGCAGAAGCTAATTATCATGCCTACCATAATCGTGCCAATTTTGGAGGTGTTGCGCCGACGCGTTCTTCATTATTGCCAAAATTGTGTGGGGAAAACCTTTTCGTTACGATGTTGGATTTTCGCGCCGCTACAAAAGTGCACATGAAGAACTTAATCGACACCAAGGAAGCGCATGATTCCATAGCTAATAATATTTCTTGCATCATGGGTGAGCGTGTCAAGCCTGAGTTGTTGAAAAAACACGGTATTGTCCAAACTCCGCCAGATTTCGATATAACCAAGGGCGCGTCTTATGATTGCAAAAATAAGTATTCTTTGTCCGGCGTTCCAAATCAAGAGACAGGGTCTTACGGCTATGCATCACGATCTGTCTCTAATCCTTTTATTGAAAAAGGCGAGAACCATCATGCCCGAGCAATCAACAGTGAGCGGGCATTGACGCCAAGGAATTGTGTCGATGCATTGCAGCCGCTCCTACAGAAAAGTGAGCGCCTAAGTCCTGAAGCCCAATTCCGTGCAGGGCAAGCTCTGCTGATACTCAGGCCGTTGTACTGTAGTTCAGAAAATTGGGGAGATGCTCACAAAGTACTGATGCCCTTTCTTGAAAAAAAGGGTCTAGTTTCTTCTCAGGAAAATCAAAAGCTTGGCGCAACTAGGCCGTTTACACAAACCGATATGGAAAAAGGAATTGCACGGCGCAATACTAGCCTTGCAGGACCTACACTAAACAAGCTTAACATATTTTTGCAAAAGTCGATTTACAACAAAGATGAAAAAGCAATAAGTGATCTGACAGCCAAAAAGCTGGGTGAAATGAAATACATCCCTATCGCCCATTTCAAGATGAATGAAGATGTTTCCAGCTTTGAGGATTCTTCTGGTCTGGCTGATTCATTTACTGGATATAACGTATCGGCATACATCAATCATGCACGCTTGTTGAGTGGTGAGGACAGACTTTCCAAGAAAGACGTGATCGCCATAGTAGGATGCCTTAATGCGATTTACGACAACGCCAGTAGTGAACGCCACACTCTTAGGGAAATTGCGCACGGGTGTTTCGTTGGAGCTGGCTACACAGTGGAGGATGCTGAAGATTTTTACAATGACGCATGCAAGGCTGCAGCGACAGAGTTTTATGGCGGAAGGGCGATCAATGTACAATCGCAGCTATACAGTAGCTCGGTTGACAAGCCTGATTCGTAA
Protein sequence:
MQIRNSHLYSASRLVQNTFNASSTKEAANTIAKNNESAALSATQTARTHEGDSKGKSSNGSRSHLRSMRYAAYLAGSAYLYDKTVNDFFLSTTSLNDGKQGFTSDARLQKAEKKAEANYHAYHNRANFGGVAPTRSSLLPKLCGENLFVTMLDFRAATKVHMKNLIDTKEAHDSIANNISCIMGERVKPELLKKHGIVQTPPDFDITKGASYDCKNKYSLSGVPNQETGSYGYASRSVSNPFIEKGENHHARAINSERALTPRNCVDALQPLLQKSERLSPEAQFRAGQALLILRPLYCSSENWGDAHKVLMPFLEKKGLVSSQENQKLGATRPFTQTDMEKGIARRNTSLAGPTLNKLNIFLQKSIYNKDEKAISDLTAKKLGEMKYIPIAHFKMNEDVSSFEDSSGLADSFTGYNVSAYINHARLLSGEDRLSKKDVIAIVGCLNAIYDNASSERHTLREIAHGCFVGAGYTVEDAEDFYNDACKAAATEFYGGRAINVQSQLYSSSVDKPDS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
56673.5 515 8.83 -0.539 38.56
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Phaseolus vulgaris Disease name: Halo blight of bean
Host classification: Eudicots NCBI Species: 3885
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9SCK1
Protein RESPONSE TO LOW SULFUR 1
LSU1
Arabidopsis thaliana (related: thale cress)
MANRGGCVTVAAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQISRLSSSSVVSSS