Effector profile
| PlantPEAD ID: PlantPEAD01018 | Uniprot ID: A0A0P9UR33 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. maculicola strain ICMP3935 | Other name: |
| Gene name: HOPH1 | NCBI Gene ID: LJQR01000091 | |
| Entry name: A0A0P9UR33_PSEYM | Protein name: Type III effector HopH1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGATCACTCCGTCTCGATATCCAGGCATCTATATCGCCCCCCTCAGTAACGAACCGACAGCAGCTCACACATTTAAAGAACAAGCAGAGGAAGCACTTGACCATATCAGCGCCGCACCCTCTGGCGATAAGCTATTGCGAAAAATATCCACTCTTGCCAGTCAAAAAGATAGAAAAGTCACGCTAAAAGAGATTGAAATAAATAACCAGTGTTATACCGAAGCTGTTCTGAGCAGGAGGCAACTGGAAAAGTACGAACCAGAAAACTTTAACGAGAACCGGCACATTGCATCACAGCTATCACGAAAGGGGACCTTTACCAAAGGTGAAGGAAGCAACGCGATTATTGGCTGGTCACCAGACAAAGCAAGCATACGCTTAAATCAGAATGGCTCACCGTTACACCTTGGAATGGATAACGACGACAAAATCACGACCCTAGCTCATGAGCTCGTTCATGCTCGACATGTGTTAGGTGGCAGCTCCTTAGCGGATGGCGGAGATCGCTATAATCCACGTACGGGATCTGGCAAAGAGGAACTTAGGGCCGTTGGATTAGATAAGTACCGCTATTCACTTACAAAAAAACCGTCAGAGAACTCCATCCGAGCTGAACACGGCCTGCCTCTGCGCATGAAGTACAGGGCACATCAATAG
Protein sequence:
MITPSRYPGIYIAPLSNEPTAAHTFKEQAEEALDHISAAPSGDKLLRKISTLASQKDRKVTLKEIEINNQCYTEAVLSRRQLEKYEPENFNENRHIASQLSRKGTFTKGEGSNAIIGWSPDKASIRLNQNGSPLHLGMDNDDKITTLAHELVHARHVLGGSSLADGGDRYNPRTGSGKEELRAVGLDKYRYSLTKKPSENSIRAEHGLPLRMKYRAHQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24315.3 | 218 | 9.21 | -0.802 | 33.95 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR028208
Pfam: PF14891
SMART:
KEGG:
PRINTS: